Evidence map›Paper›PMID 40386442›Full record

ArticleSynthetic and systems biotechnology2025

Extending dynamic and operational range of the biosensor responding to l-carnitine by directed evolution.

Tingting Li, Huina Dong, Jinlong Li, Huiying Wang, Chunxiang Pu, Siyu Chen, Zhiying Yang, Xinyi Ren, Xuan Liu, Zhaoxia Jin and 1 more

Abstract read
In one paragraph

Article in Synthetic and systems biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tingting LiSchool of Biological Engineering, Dalian Polytechnic University, Dalian, China.
Huina DongTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Jinlong LiTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Huiying WangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Chunxiang PuTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Siyu ChenTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Zhiying YangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Xinyi RenTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Xuan LiuTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Zhaoxia JinSchool of Biological Engineering, Dalian Polytechnic University, Dalian, China.
Dawei ZhangSchool of Biological Engineering, Dalian Polytechnic University, Dalian, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

l-carnitine is a quaternary amine compound essential for eukaryotic metabolism. It is mainly involved in the oxidative decomposition of medium-and long-chain fatty acids and provides energy for the body. Therefore, it is widely used in health care and food additives. As a pivotal transcriptional activator of l-carnitine metabolism, CaiF is notably activated by crotonobetainyl-CoA, a key intermediate product in the carnitine metabolic pathway. Capitalizing on this mechanism, a sophisticated biosensor was ingeniously developed. Nevertheless, it is worth mentioning that the biosensor currently exhibits a relatively restricted detection range, which results in some specific limitations in practical application scenarios. In this paper, we constructed a biosensor based on CaiF and developed a strategy for modifying this biosensor. The structural configuration of CaiF was formulated by computer-aided design, and the DNA binding site was simulated, which was verified by alanine scanning. Functional Diversity-Oriented Volume-Conservative Substitution Strategy of the key sites of CaiF was conducted to extend the dynamic range of the biosensor. The biosensor based on CaiF

Indexed as

BiosensorCaiFDetection rangel-carnitineTranscription factor

Identifiers

PMID40386442
PMCPMC12083890

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.