Evidence map›Paper›PMID 40393458›Full record

ArticleCell genomics2025

Phenotypic heterogeneity and plasticity in colorectal cancer metastasis.

Samuel Ogden, Nasrine Metic, Ozen Leylek, Elise A Smith, Alison M Berner, Ann-Marie Baker, Imran Uddin, Marta Buzzetti, Marco Gerlinger, Cancer Tissue Bank and 3 more

Abstract read
In one paragraph

Article in Cell genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Targeting the Epigenome in Colorectal Cancer.International journal of molecular sciences · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Advances in Colorectal Cancer Cell Biology and Clonal Evolution.International journal of molecular sciences · 2026
    Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Samuel OgdenBarts Cancer Institute, Queen Mary University of London, London, UK.
Nasrine MeticBarts Cancer Institute, Queen Mary University of London, London, UK.
Ozen LeylekBarts Cancer Institute, Queen Mary University of London, London, UK.
Elise A SmithBarts Cancer Institute, Queen Mary University of London, London, UK.
Alison M BernerBarts Cancer Institute, Queen Mary University of London, London, UK.
Ann-Marie BakerThe Institute of Cancer Research, London, UK.
Imran UddinCRUK City of London Centre Single Cell Genomics Facility, University College London, London, UK.
Marta BuzzettiBarts Cancer Institute, Queen Mary University of London, London, UK.
Marco GerlingerBarts Cancer Institute, Queen Mary University of London, London, UK.
Cancer Tissue BankBarts Cancer Institute, Queen Mary University of London, London, UK.
Trevor GrahamThe Institute of Cancer Research, London, UK.
Hemant M KocherBarts Cancer Institute, Queen Mary University of London, London, UK.
Mirjana EfremovaBarts Cancer Institute, Queen Mary University of London, London, UK. Electronic address: m.efremova@qmul.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenotypic heterogeneity and plasticity in colorectal cancer (CRC) has a crucial role in tumor progression, metastasis, and therapy resistance. However, the regulatory factors and the extrinsic signals driving phenotypic heterogeneity remain unknown. Using a combination of single-cell multiomics and spatial transcriptomics data from primary and metastatic CRC patients, we reveal cancer cell states with regenerative and inflammatory phenotypes that closely resemble metastasis-initiating cells in mouse models. We identify an intermediate population with a hybrid regenerative and stem phenotype. We reveal the transcription factors AP-1 and nuclear factor κB (NF-κB) as their key regulators and show localization of these states in an immunosuppressive niche both at the invasive edge in primary CRC and in liver metastasis. We uncover ligand-receptor interactions predicted to activate the regenerative and inflammatory phenotype in cancer cells. Together, our findings reveal regulatory and signaling factors that mediate distinct cancer cell states and can serve as potential targets to impair metastasis.

Indexed as

Colorectal NeoplasmsAnimalsCell Line, TumorCell PlasticityFemaleGene Expression Regulation, NeoplasticHumansLiver NeoplasmsMiceNeoplasm MetastasisNeoplastic Stem CellsNF-kappa BPhenotypeSignal TransductionSingle-Cell AnalysisTranscription Factor AP-1NF-kappa BTranscription Factor AP-1AP-1colorectal cancermetastasisNOTUMphenotypic heterogeneityplasticitysingle-cell multiomicsspatial transcriptomics

Identifiers

PMID40393458
PMCPMC12278653

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.