Genome mining identifies a diversity of natural product biosynthetic capacity in human respiratory
Ashley L Cunningham, Ilya Y Zhbannikov, Rachel Myers, Tommy H Tran, Wei Gao, Katherine P Lemon, Jhoanna N Aquino, Jillian H Hurst, Joon Won Yoon, Patrick C Seed and 1 more
Article in mSphere, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
2 · The registry
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
5 · Who and what money
Authors and funding
11 authors.
Ashley L CunninghamDepartment of Pediatrics, Northwestern University, Chicago, Illinois, USA.ORCID 0000-0002-3608-9751
Ilya Y ZhbannikovDepartment of Medicine Clinical Research Unit, Duke University, Durham, North Carolina, USA.
Rachel MyersDepartment of Medicine Clinical Research Unit, Duke University, Durham, North Carolina, USA.
Tommy H TranAlkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA.
Wei GaoThe Forsyth Institute (Microbiology), Cambridge, Massachusetts, USA.
Katherine P LemonAlkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-1542-1679
Jhoanna N AquinoDivision of Pediatric Infectious Diseases, Duke University, Durham, North Carolina, USA.
Jillian H HurstDivision of Pediatric Infectious Diseases, Duke University, Durham, North Carolina, USA.
Joon Won YoonDepartment of Pediatrics, Northwestern University, Chicago, Illinois, USA.
Patrick C SeedDepartment of Pediatrics, Northwestern University, Chicago, Illinois, USA.
Matthew S KellyDivision of Pediatric Infectious Diseases, Duke University, Durham, North Carolina, USA.ORCID 0000-0001-8819-2315
Funding
Mechanisms of Corynebacterium-Dolosigranulum Interactions that Shape Human Nasal MicrobiotaR35GM141806 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI LEMON, KATHERINE PAIGE · 2021 to 2025
$2.0M
MICROBIAL SUCCESSION AND ADAPTIVE IMMUNE RESPONSES IN THE PREMATURE INFANTR01GM108494 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SEED, PATRICK C. · 2014 to 2017
$1.4M
Nasopharyngeal Microbiome and Risk of Bacterial Pathogen Colonization in InfantsK23AI135090 · NIAID · DUKE UNIVERSITY · PI KELLY, MATTHEW SCOTT · 2018 to 2022
$860k
Rational identification of Corynebacterium strains for use as probioticsR21AI154081 · NIAID · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI KELLY, MATTHEW SCOTT, SEED, PATRICK C. · 2022 to 2023
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.
Genome mining identifies a diversity of natural product biosynthetic capacity in human respiratory · full record | Socratic