Evidence map›Paper›PMID 40396791›Full record

ArticleMicrobiology spectrum2025

Synergistic co-metabolism enhancing the crude oil degradation by

Lairenjam Paikhomba Singha, Renuka Kumari, Keisam Malabika Singha, Piyush Pandey, Pratyoosh Shukla

Abstract read
In one paragraph

Article in Microbiology spectrum, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lairenjam Paikhomba SinghaEnzyme Technology and Protein Bioinformatics Laboratory, School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, India.ORCID 0000-0002-0931-6410
Renuka KumariEnzyme Technology and Protein Bioinformatics Laboratory, School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, India.
Keisam Malabika SinghaSchool of Life Science, Central University of Rajasthan, Ajmer, Rajasthan, India.
Piyush PandeySoil and Environmental Microbiology Laboratory, Department of Microbiology, Assam University, Silchar, Assam, India.
Pratyoosh ShuklaEnzyme Technology and Protein Bioinformatics Laboratory, School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, India.ORCID 0000-0002-9307-4126

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial degradation of hydrocarbons during co-metabolism with glucose often resulted in variable degradation efficiency. This study explored the mechanistic understanding of the metabolic response during co-metabolism in IMPORTANCE: In hydrocarbon-contaminated soil, the presence of easily metabolizable carbon sources can lead to carbon catabolite repression. This repression reduces the activity of hydrocarbon-degrading bacteria, slowing down the rate of bioremediation. In this study, the most robust yet underexplored tool-liquid chromatography-high resolution accurate mass spectrometry system-was used to study the metabolic response and functional state of A. oleivorans DR1 during the crude oil degradation in the presence or absence of either biosurfactant or glucose supplementation. Here, synergistic co-metabolism by DR1 for crude oil degradation is reported. DR1 preferred hydrocarbons over glucose since glucose was not readily utilizable due to lack of enzymes (e.g., glucokinase). However, the glucose enhanced the hydrocarbon degradation in DR1 through the high production of organic acids that reacted on hydrocarbon chains and underwent fatty acid synthesis. This study added

Indexed as

AcinetobacterPetroleumBiodegradation, EnvironmentalCulture MediaFatty AcidsGlucoseHydrocarbonsMetabolic Networks and PathwaysMetabolomicsSurface-Active AgentsCulture MediaFatty AcidsGlucoseHydrocarbonsPetroleumSurface-Active Agentsbiosurfactantcarbon catabolite repression (CCR)co-metabolismcrude oilhydrocarbonsynergistic

Identifiers

PMID40396791
PMCPMC12252389

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.