Evidence map›Paper›PMID 40428413›Full record

ArticleGenes2025

Pharmacogenetic Profiling of Genes Associated with Outcomes of Chemotherapy in Omani Healthy Controls.

Nahad Al-Mahrouqi, Nada Al Shuaili, Shoaib Al-Zadjali, Anoopa Pullanhi, Hamida Al-Barwani, Aida Al-Kindy, Hadeel Al-Sharqi, Khalid Al-Baimani, Mansour Al-Moundhri, Bushra Salman

Abstract read
In one paragraph

Article in Genes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Nahad Al-MahrouqiResearch Laboratories, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.
Nada Al ShuailiResearch Laboratories, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.
Shoaib Al-ZadjaliResearch Laboratories, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.ORCID 0000-0002-8155-2063
Anoopa PullanhiResearch Laboratories, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.
Hamida Al-BarwaniResearch Laboratories, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.
Aida Al-KindyClinical Trials Department, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.ORCID 0000-0003-4632-6965
Hadeel Al-SharqiPharmacy Department, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.
Khalid Al-BaimaniDepartment of Medical Oncology, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.
Mansour Al-MoundhriDepartment of Medical Oncology, Sultan Qaboos Comprehensive Cancer Care & Research Centre, University Medical City, Muscat 123, Oman.
Bushra SalmanPharmacy Department, Omani National Hematology and Bone Marrow Transplant Center, University Medical City, Muscat 123, Oman.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

objectivesPharmacogenomic screening plays a crucial role in optimizing chemotherapy outcomes and minimizing toxicity. Characterizing the baseline distribution of genetic variants in specific populations is essential to inform the prioritization of drug-gene combinations for clinical implementation. The objective of this study was to investigate the distribution of pharmacogenetic variants in 36 genes related to the fluoropyrimidine (FP) pathway among healthy Omani individuals, forming a foundation for future studies in cancer patients receiving FP-based chemotherapy.

methodsNinety-eight healthy Omani participants aged ≥18 years were recruited at the Sultan Qaboos Comprehensive Cancer Care and Research Center. Whole-blood samples were collected, and genomic DNA was extracted. Targeted next-generation sequencing was performed using a custom Ion AmpliSeq panel covering coding exons and splice-site regions of 36 genes involved in FP metabolism and response.

resultsA total of 999 variants were detected across the 36 genes, with 63.3% being heterozygous. The

conclusionsThis study reveals key pharmacogenetic variants in the Omani population, underscoring the importance of integrating pharmacogenomic testing into routine care to support safer, more personalized chemotherapy in the region.

Indexed as

NeoplasmsPharmacogenomic VariantsAdultAgedATP-Binding Cassette, Sub-Family C ProteinsFemaleFluorouracilHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedMutationOmanPharmacogeneticsPharmacogenomic TestingPolymorphism, Single NucleotideATP-Binding Cassette, Sub-Family C ProteinsFluorouracilABCC4DPYDfluoropyrimidinesMTHFRnext-generation sequencingpopulation pharmacogeneticsUPB1

Identifiers

PMID40428413
PMCPMC12110867

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.