Evidence map›Paper›PMID 40429953›Full record

ArticleInternational journal of molecular sciences2025

Endophenotype-Informed Association Analyses for Liver Fat Accumulation and Metabolic Dysfunction in the Fels Longitudinal Study.

Ariana L Garza, John Blangero, Miryoung Lee, Cici X Bauer, Stefan A Czerwinski, Audrey C Choh

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ariana L GarzaSchool of Public Health, UT Health Science Center, Brownsville, TX 78520, USA.ORCID 0000-0002-5819-4405
John BlangeroSchool of Medicine, South Texas Diabetes and Obesity Institute, University of Texas Rio Grande Valley, Brownsville, TX 78520, USA.ORCID 0000-0001-6250-5723
Miryoung LeeSchool of Public Health, Division of Epidemiology, Human Genetics and Environmental Sciences, UT Health Science Center, Brownsville, TX 78520, USA.ORCID 0000-0003-4088-304X
Cici X BauerSchool of Public Health, Division of Biostatistics, UT Health Science Center, Houston, TX 77030, USA.ORCID 0000-0002-2337-7965
Stefan A CzerwinskiSchool of Health and Rehabilitation Sciences, College of Medicine, Ohio State University, Columbus, OH 43004, USA.
Audrey C ChohSchool of Public Health, Division of Epidemiology, Human Genetics and Environmental Sciences, UT Health Science Center, Brownsville, TX 78520, USA.ORCID 0000-0001-6365-7411

Funding

SOLAR-Eclipse Computational Tools for Imaging GeneticsR01EB015611 · NIBIB · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KOCHUNOV, PETER V. · 2012 to 2024
$5.0M
Cancer Prevention and Research Institute of Texas RP210042NIBIB NIH HHS R01 EB015611NIH HHS 5R01DK111201-05NIH HHS 5R01HD012252-34
6 · The paper itself

Abstract

The identification of causal genomic regions for liver fat accumulation in the context of metabolic dysfunction remains a challenging goal. This study aimed to identify potential endophenotypes for liver fat content and employ them in bivariate linkage searches for pleiotropic genetic regions where targeted association analysis is more likely to reveal significant variants. Multiple metabolic risk and adiposity distribution traits were assessed using the endophenotype ranking value. The top-ranked endophenotypes were then used in a bivariate linkage analysis, paired with liver fat content. Quantitative trait loci (QTLs) identified as significant or suggestive were targeted for measured genotype association analyses. The highest-ranked endophenotypes for liver fat accumulation were insulin resistance (IR), visceral adipose tissue (VAT), and high-density lipoprotein cholesterol (HDL-C). The univariate linkage analysis for liver fat content identified one significant QTL at chromosome 17p13.2 (Logarithm of odds score (LOD) = 2.90,

Indexed as

EndophenotypesLiverAdiposityAdultFemaleGenetic LinkageGenome-Wide Association StudyHumansInsulin ResistanceIntra-Abdominal FatLongitudinal StudiesMaleMiddle AgedPolymorphism, Single NucleotideQuantitative Trait Lociendophenotypefamily studiesgenotype associationlinkageMASLD

Identifiers

PMID40429953
PMCPMC12112654

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.