Evidence map›Paper›PMID 40433159›Full record

ArticleFrontiers in plant science2025

Genetic dissection of Septoria tritici blotch and Septoria nodorum blotch resistance in wheat using GWAS.

Alma Kokhmetova, Nagenahalli Dharmegowda Rathan, Deepmala Sehgal, Shaukat Ali, Yuliya Zeleneva, Madina Kumarbayeva, Ardak Bolatbekova, Gopalareddy Krishnappa, Zhenis Keishilov, Asia Kokhmetova and 2 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Genome-Wide Association Mapping of Resistance toPlants (Basel, Switzerland) · 2026
    Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Alma KokhmetovaLaboratory of Breeding and Genetics, Institute of Plant Biology and Biotechnology (IPBB), Almaty, Kazakhstan.
Nagenahalli Dharmegowda RathanDiscovery Breeding Team, Corteva Agriscience, Hyderabad, Telangana, India.
Deepmala SehgalSyngenta, Jealott's Hill International Research Centre, Bracknell, United Kingdom.
Shaukat AliAgronomy, Horticulture, and Plant Science Department, South Dakota State University, Brookings, SD, United States.
Yuliya ZelenevaLaboratory of Mycology and Phytopathology, All Russian Institute of Plant Protection, St. Petersburg-Pushkin, Russia.
Madina KumarbayevaLaboratory of Breeding and Genetics, Institute of Plant Biology and Biotechnology (IPBB), Almaty, Kazakhstan.
Ardak BolatbekovaLaboratory of Breeding and Genetics, Institute of Plant Biology and Biotechnology (IPBB), Almaty, Kazakhstan.
Gopalareddy KrishnappaDepartment of Genetics and Plant Breeding, Indian Council of Agricultural Research (ICAR)-Sugarcane Breeding Institute, Coimbatore, India.
Zhenis KeishilovLaboratory of Breeding and Genetics, Institute of Plant Biology and Biotechnology (IPBB), Almaty, Kazakhstan.
Asia KokhmetovaLaboratory of Breeding and Genetics, Institute of Plant Biology and Biotechnology (IPBB), Almaty, Kazakhstan.
Kanat MukhametzhanovLaboratory of Breeding and Genetics, Institute of Plant Biology and Biotechnology (IPBB), Almaty, Kazakhstan.
Kanat BakhytulyLaboratory of Breeding and Genetics, Institute of Plant Biology and Biotechnology (IPBB), Almaty, Kazakhstan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Septoria blotch is a globally significant disease, which ranks second in importance after wheat rusts that causes substantial yield losses. The development of Septoria blotch resistant cultivars through molecular approaches is both economical and sustainable strategy to contain the disease. Methods: For identifying genomic regions associated with resistance to Septoria tritici blotch (STB) and Septoria nodorum blotch (SNB) in wheat, a genome-wide association study (GWAS) was conducted using a diverse panel of 191 spring and winter wheat genotypes. The panel was genotyped using DArTseq™ technology and phenotyped under natural field conditions for three cropping seasons (2019-2020, 2020-2021, and 2021-2022) and under artificially inoculated field conditions for two cropping seasons (2020-2021 and 2021-2022). Additionally, the panel was phenotyped under greenhouse conditions for STB (five mixed isolates in a single experiment) and SNB (four independent isolates and a purified toxin in five different independent experiments). Results and Discussion: GWAS identified nine marker-trait associations (MTAs), including six MTAs for different isolates under greenhouse conditions, two MTAs under natural field conditions, and one MTA under artificially inoculated field conditions. A pleiotropic MTA (100023665) was identified on chromosome 5B governing resistance against SNB isolate Pn Sn2K_USA and SNB purified toxin Pn ToxA_USA and explaining 30.73% and 46.94% of phenotypic variation, respectively.

Indexed as

candidate genesGWASMTAsSeptoria nodorum blotchSeptoria tritici blotch

Identifiers

PMID40433159
PMCPMC12106303

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.