Evidence mapPaperPMID 40435219Full record

ArticlePloS one2025

Verification of the chromosome number using cytogenetics and estimation of genome size via flow cytometry and k-mer analyses for representative Anoectochilus roxburghii accessions.

Wenting Zhang, Yu Mei, Jihua Wang

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In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Wenting ZhangCrop Research Institute, Guangdong Academy of Agriculture Sciences/Guangdong Provincial Key Laboratory of Crops Genetics and Improvement Guangdong/Guangdong Provincial Engineering & Technology Research Center for Conservation and Utilization of the Genuine Southern Medicinal Resources, Guangzhou, Guangdong, China.ORCID https://orcid.org/0000-0001-7670-5574
Yu MeiCrop Research Institute, Guangdong Academy of Agriculture Sciences/Guangdong Provincial Key Laboratory of Crops Genetics and Improvement Guangdong/Guangdong Provincial Engineering & Technology Research Center for Conservation and Utilization of the Genuine Southern Medicinal Resources, Guangzhou, Guangdong, China.
Jihua WangCrop Research Institute, Guangdong Academy of Agriculture Sciences/Guangdong Provincial Key Laboratory of Crops Genetics and Improvement Guangdong/Guangdong Provincial Engineering & Technology Research Center for Conservation and Utilization of the Genuine Southern Medicinal Resources, Guangzhou, Guangdong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anoectochilus roxburghii (Wall.) Lindl. is a perennial herb of orchidaceae. Because of its functions of heat-clearing and blood-cooling, removing dampness, detoxification and enhancing immunity, it is considered as a nutritious medicinal plant with high economic value. Originating from Guangdong province, China, chromosome number and genome size of A. roxburghii ("Luofushan-1") were determined through cytogenetics, flow cytometry, and k-mer analysis. We analyzed the karyotype of A. roxburghii using different cytogenetic markers, and the results showed a chromosome number of 2n = 80, but no sex-linked chromosome heterotropy was observed. For flow cytometry analysis, tomato and maize were used as internal standard, and the 2C DNA amount among sixteen Anoectochilus accessions ranged from 6.57 to 8.26 pg (including Luofushan-1). Additionally, a genome survey of "Luofushan-1" was performed using Illumina HiSeq 2000 DNA sequencing, k-mer analysis revealed that the genome size of "Luofushan-1" was approximately 5.68 Gbp. This comprehensive study establishes a foundation for subsequent whole-genome sequencing of A. roxburghii, contributing valuable insights into its genetic characteristics and paving the way for further research on this medicinal plant.

Indexed as

Chromosomes, PlantGenome, PlantGenome SizeOrchidaceaeCytogeneticsFlow Cytometry

Identifiers

PMID40435219
PMCPMC12119010

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.