Evidence map›Paper›PMID 40446003›Full record

ArticlePloS one2025

T7 RNA polymerase-based gene expression from a transcriptionally silent rDNA spacer in the endosymbiont-harboring trypanosomatid Angomonas deanei.

Lena Kröninger, Anay K Maurya, Christian Stiebeling, Florian P Stirba, Zio Kim, Eva C M Nowack

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lena KröningerDepartment of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Anay K MauryaDepartment of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.ORCID 0000-0001-5560-2875
Christian StiebelingDepartment of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Florian P StirbaDepartment of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Zio KimDepartment of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Eva C M NowackDepartment of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.ORCID 0000-0002-6920-6838

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotic life has been shaped fundamentally by the integration of bacterial endosymbionts. The trypanosomatid Angomonas deanei that contains a β-proteobacterial endosymbiont, represents an emerging model to elucidate initial steps in symbiont integration. Although the repertoire of genetic tools for A. deanei is growing, no conditional gene expression system is available yet, which would be key for the functional characterization of essential or expression of toxic proteins. Development of a conditional expression system based on endogenous RNA polymerase II (POLII) is hampered by the absence of information on transcription signals in A. deanei as well as the unusual genetic system used in the Trypanosomatidae that relies on read-through transcription. This mode of transcription can result in polar effects when manipulating expression of genes in their endogenous loci. Finally, only a few resistance markers are available for A. deanei yet, restricting the number of genetic modifications that can be introduced into one strain. To increase the range of possible genetic manipulations in A. deanei, and in particular, build the base for a conditional expression system that does not interfere with the endogenous gene expression machinery, here we (i) implemented two new drug resistance markers, (ii) identified the spacer upstream of the rDNA array on chromosome 13 as transcriptionally silent genomic locus, and (iii) used this locus for engineering an ectopic expression system that depends on the T7 RNA polymerase expressed from the δ-amastin locus. We show that transgene expression in this system is independent of the activity of endogenous RNA polymerases, reaches expression levels similar to the previously described POLII-dependent expression from the γ-amastin locus, and can be applied for studying endosymbiosis. In sum, the new tools expand the possibilities for genetic manipulations of A. deanei and provide a solid base for the development of an ectopic conditional expression system.

Indexed as

DNA-Directed RNA PolymerasesDNA, RibosomalSymbiosisTrypanosomatinaViral ProteinsTranscription, Geneticbacteriophage T7 RNA polymeraseDNA-Directed RNA PolymerasesDNA, RibosomalViral Proteins

Identifiers

PMID40446003
PMCPMC12124550

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.