Evidence map›Paper›PMID 40448002›Full record

ArticleBMC genomics2025

The BBX family and their response to abiotic stress in ginger (Zingiber officinale Roscoe).

Jia-Yu Shi, Yun-Rui Tang, Hong-Lei Li, Hai-Tao Xing

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Functional Characterization ofInternational journal of molecular sciences · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jia-Yu ShiCollege of Smart Agriculture/Institute of Special Plants, Chongqing University of Arts and Sciences, Chongqing, 402168, China.
Yun-Rui TangCollege of Smart Agriculture/Institute of Special Plants, Chongqing University of Arts and Sciences, Chongqing, 402168, China.
Hong-Lei LiCollege of Smart Agriculture/Institute of Special Plants, Chongqing University of Arts and Sciences, Chongqing, 402168, China. lihonglei215@cqwu.edu.cn.
Hai-Tao XingCollege of Smart Agriculture/Institute of Special Plants, Chongqing University of Arts and Sciences, Chongqing, 402168, China. xinght@cqwu.edu.cn.

Funding

Chongqing Science and Technology support projects CSTB2022NSCQ-MSX1263Chongqing Science and Technology support projects CSTB2023TIAD-KPX0025Chongqing Talents Program for Young Top Talents CQYC20220510999Special Funding for Chongqing Postdoctoral Research Project 2022CQBSHTB3023the Foundation for High-level Talents of Chongqing University of Arts and Sciences P2021YL11
6 · The paper itself

Abstract

backgroundGinger (Zingiber officinale Roscoe), a plant of considerable medicinal and culinary importance, frequently encounters adverse environmental challenges in cultivation. While BBX genes are recognized as fundamental regulators of plant growth and developmental processes, and responses to biotic and abiotic stresses, a comprehensive characterization of the BBX gene family in ginger has yet to be fully accomplished.

resultThis study identified 31 members of the BBX gene family in ginger, designated as ZoBBXs, and analyzed their principal characteristics. A comprehensive analysis was conducted on the gene features, conserved protein motifs, chromosome location, phylogenetic relationships, and gene duplication events in ZoBBXs. Based on their gene structures, conserved domains, and motifs, the ZoBBX genes were categorized into five distinct groups. Additionally, the expression patterns of ZoBBXs were investigated across various developmental stages and in response to abiotic stresses, including ABA, cold, drought, heat, and salt treatments, utilizing RNA-seq data and qRT-PCR analysis. Notably, ZoBBX#11 and ZoBBX#27 were identified as potential key regulators of flowering, whereas ZoBBX#05 and ZoBBX#17 appear to play significant roles in stress response mechanisms.

conclusionThis study provides a comprehensive analysis of the BBX gene family in ginger, laying the groundwork for future research into the roles of specific ZoBBX genes in ginger's growth, development, and tolerance to abiotic stresses.

Indexed as

Multigene FamilyPlant ProteinsStress, PhysiologicalZingiber officinaleGene DuplicationGene Expression Regulation, PlantPhylogenyPlant ProteinsAbiotic stressExpression patternsGingerRhizome developmentZoBBX

Identifiers

PMID40448002
PMCPMC12123811

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.