Evidence mapPaperPMID 40475680Full record

ArticlebioRxiv : the preprint server for biology2025

DJ-1 deficiency and aging: dual drivers of retinal mitochondrial dysfunction.

Mala Upadhyay, Johnathon Sturgis, Sanghamitra Bhattacharyya, Ke Jiang, Stephanie A Hagstrom, Vera L Bonilha

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In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mala UpadhyayDepartment of Ophthalmic Research, Cole Eye Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID 0000-0002-0591-6515
Johnathon SturgisDepartment of Ophthalmic Research, Cole Eye Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID 0000-0003-0454-8201
Sanghamitra BhattacharyyaDepartment of Ophthalmic Research, Cole Eye Institute, Cleveland Clinic, Cleveland, OH, USA.
Ke JiangDepartment of Ophthalmic Research, Cole Eye Institute, Cleveland Clinic, Cleveland, OH, USA.
Stephanie A HagstromDepartment of Ophthalmic Research, Cole Eye Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID 0000-0003-3897-0769
Vera L BonilhaDepartment of Ophthalmic Research, Cole Eye Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID 0000-0002-6166-5124

Funding

NEI Center Core Grant for Vision ResearchP30EY025585 · CLEVELAND CLINIC LERNER COM-CWRU · 2025 to 2025
$644k
Cole Eye Institute Vision Science Training ProgramT32EY024236 · CLEVELAND CLINIC LERNER COM-CWRU · 2025 to 2025
$82k
Characterizing the role of mitochondrial DNA mutations on retinal degeneration.F31EY035133 · CLEVELAND CLINIC LERNER COM-CWRU · 2025 to 2025
$50k
NEI NIH HHS F31 EY035133NEI NIH HHS P30 EY025585NEI NIH HHS T32 EY024236
6 · The paper itself

Abstract

We have previously extensively characterized the role of DJ-1 in oxidative stress regulation in the retina and RPE during aging. However, the DJ-1 protein also plays a role in regulating mitochondria's response to oxidative stress by translocating to the mitochondria where it helps clear generated reactive oxygen species (ROS). To study the effects of aging and oxidative stress in the retina, the DJ-1 KO mouse was analyzed. Freshly dissected ex vivo retinal punches were analyzed for real-time live cell metabolism. Total DNA and protein were isolated from RPE, and retina of 3- and 15-month-old DJ-1 WT and DJ-1 KO mice. The mitochondrial DNA (mtDNA) genome was divided into four discrete regions (RI-RIV), and lesions/10kb were quantified using long-extension PCR. mtDNA content was analyzed using RT-qPCR. Protein levels of OXPHOS complexes, POLG, OGG1, SOD2, and PGC1α were measured by western blotting. Seahorse analysis detected significantly decreased basal and maximal OCR in 3- and 15-month-old DJ-1 KO compared to age-matched DJ-1 WT. In the RPE, a significant decrease in the protein levels of the NDUFB8 subunit of CI, the SDHB subunit of CII, and MTCO1 of CIV in 15-month-old DJ-1 KO mice compared to 15-month-old DJ-1 WT, while the ATP5A subunit of CV was significantly decreased in 3-month-old DJ-1 KO mice compared to 3-month-old DJ-1 WT. In the retina, significantly decreased levels of NDUFB8 subunit of CI and MTCO1 of CIV were detected in the in 3-month-old DJ-1 KO mice compared to 3-month-old DJ-1 WT. We observed a significant increase in mtDNA gene content in 15-month-old DJ-1 KO RPE and retina compared to age-matched DJ-1 WT. The PGC1α levels significantly decreased in 3- and 15-month-old RPE lysates compared to their age group DJ-1 WT. However, in the retina, there was only a decrease in DJ-1 WT with aging. The POLG levels increased when 15-month-old DJ-1 KO lysates were compared to 15-month-old DJ-1 WT. The mtDNA lesions in the RPE detected a trend of increase in 15-month-old DJ-1 WT and DJ-1 KO RPE in all regions compared to 3-month-old mice. In the retina, a significant increase in mtDNA lesions/10kb accumulation in the 15-month-old DJ-1 WT RIV was detected compared to 3-month-old DJ-1 WT. The OGG1 levels significantly increased in 3-month-old retinal lysates compared to the 3-month-old DJ-1 WT. Our findings suggest that DJ-1 is critical for mitochondrial regulation and function in RPE and retina. The observed changes reflect mitochondrial dysfunction related to absence of DJ-1.

Indexed as

agingDJ-1mitochondriamtDNAretinaROS

Identifiers

PMID40475680
PMCPMC12139910

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.