Evidence mapPaperPMID 40480975Full record

ArticleNature communications2025

Cholangiocytes contribute to hepatocyte regeneration after partial liver injury during growth spurt in zebrafish.

Sema Elif Eski, Jiarui Mi, Macarena Pozo-Morales, Gabriel Garnik Hovhannisyan, Camille Perazzolo, Rita Manco, Imane Ez-Zammoury, Dev Barbhaya, Anne Lefort, Frédérick Libert and 4 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Sema Elif EskiLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, Brussels, Belgium.ORCID http://orcid.org/0000-0002-4757-8614
Jiarui MiDepartment of Cell and Molecular Biology, Karolinska Institutet, 17177, Stockholm, Sweden.ORCID http://orcid.org/0000-0001-6498-3817
Macarena Pozo-MoralesLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, Brussels, Belgium.
Gabriel Garnik HovhannisyanSignal Transduction and Metabolism Laboratory, Université libre de Bruxelles, Anderlecht, 1070, Brussels-Capital Region, Belgium.ORCID http://orcid.org/0009-0006-9647-8675
Camille PerazzoloLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, Brussels, Belgium.
Rita MancoLaboratory of Hepato-gastroenterology, Institut de Recherche Expérimentale et Clinique, Université Catholique de Louvain, Brussels, Belgium.ORCID http://orcid.org/0000-0003-0857-6322
Imane Ez-ZammouryFaculty of Pharmacy and Biomedical Sciences, Université Catholique de Louvain, Brussels, Belgium.
Dev BarbhayaIndian Institute of Technology Kanpur (IIT-Kanpur), Kanpur, India.
Anne LefortLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, Brussels, Belgium.
Frédérick LibertLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, Brussels, Belgium.
Federico MariniInstitute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany.ORCID http://orcid.org/0000-0003-3252-7758
Esteban N GurzovSignal Transduction and Metabolism Laboratory, Université libre de Bruxelles, Anderlecht, 1070, Brussels-Capital Region, Belgium.ORCID http://orcid.org/0000-0003-4642-0273
Olov AnderssonDepartment of Cell and Molecular Biology, Karolinska Institutet, 17177, Stockholm, Sweden.ORCID http://orcid.org/0000-0001-6715-781X
Sumeet Pal SinghLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, Brussels, Belgium. sumeet.pal.singh@ulb.be.ORCID http://orcid.org/0000-0002-5154-3318

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 318346496 - SFB1292/2 TP19NFonds De La Recherche Scientifique - FNRS (Belgian National Fund for Scientific Research) 40005588Fonds De La Recherche Scientifique - FNRS (Belgian National Fund for Scientific Research) 40006730Fonds De La Recherche Scientifique - FNRS (Belgian National Fund for Scientific Research) 40013427Fonds De La Recherche Scientifique - FNRS (Belgian National Fund for Scientific Research) 40020360
6 · The paper itself

Abstract

The liver's regenerative ability depends on injury extent. Minor injuries are repaired by hepatocyte self-duplication, while severe damage triggers cholangiocyte involvement in hepatocyte recovery. This paradigm is well-documented for adult animals but is less explored during rapid growth. We design two partial liver injury models in zebrafish, which were investigated during growth spurts: 1) partial ablation, killing half the hepatocytes; and 2) partial hepatectomy, removing half a liver lobe. In both injuries, de novo hepatocytes emerged alongside existing ones. Single-cell transcriptomics and lineage tracing with Cre-driver lines generated by genome editing identified cholangiocytes as the source of de novo hepatocytes. We further identify active mTORC1 signalling in the uninjured liver of growing animal to be a regulator of the enhanced plasticity of cholangiocytes. Our study suggests cholangiocyte-to-hepatocyte transdifferentiation as the primary mechanism of liver regeneration during periods of rapid growth.

Indexed as

Epithelial CellsHepatocytesLiverLiver RegenerationZebrafishAnimalsBile DuctsCell TransdifferentiationHepatectomyMechanistic Target of Rapamycin Complex 1Signal TransductionSingle-Cell AnalysisZebrafish ProteinsMechanistic Target of Rapamycin Complex 1Zebrafish Proteins

Identifiers

PMID40480975
PMCPMC12144294

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.