Evidence map›Paper›PMID 40483268›Full record

ArticleNPJ systems biology and applications2025

Changes in epistatic green-beard alleles induce domain shift in hypostatic rock-paper-scissors-like green-beard competition.

Jibeom Choi

Abstract read
In one paragraph

Article in NPJ systems biology and applications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Fraternal cooperation of hierarchical cancer parallels metazoan multicellularity and eusociality.Biological reviews of the Cambridge Philosophical Society · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Jibeom ChoiDepartment of Applied Mathematics, College of Applied Sciences, Kyung Hee University, Yongin, Republic of Korea. snu10@snu.ac.kr.

Funding

National Research Foundation of Korea RS-2024-00337511
6 · The paper itself

Abstract

Myxobacteria with compatible TraA receptors can exchange materials located on the outer membrane. Such outer membrane exchange (OME) is an efficient strategy to help clonemates. If OME occurs between cells carrying different sitAI repertoires, however, transferred toxins may harm the recipient. While traA and sitAI can be categorized as green-beard genes, the functionality of sitAI is heavily reliant on traA. In other words, the harming effect of the sitAI is invalidated without OME. Hence, I termed traA and sitAI epistatic and hypostatic green-beard genes, respectively, and proposed a handshake-dependent rock-paper-scissors-like (RPSL) model. The simulation results imply that evolutionary pressure for traA diversification is context-dependent. The competition among aggressors, susceptibles, and freeloaders determined by hypostatic sitAI repertoire exhibits cyclic dominance, yet involves the possibility of divergent dynamics. By changing the epistatic green-beard traA alleles, susceptibles can avoid invasion of the aggressors, establishing another domain of the RPSL competition (domain shift). Furthermore, I mathematically analyzed the expected relatedness between myxobacteria from the compatibility of epistatic and hypostatic green-beard alleles. Not only can it explain the polymorphism of myxobacterial traA and sitAI alleles, but the model can also be expanded to investigate the social interactions of fusogenic cancer cells.

Indexed as

Epistasis, GeneticMyxococcalesAllelesComputer Simulation

Identifiers

PMID40483268
PMCPMC12145440

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.