Evidence map›Paper›PMID 40483439›Full record

ArticleBMC plant biology2025

Complete mitochondrial genome of Houttuynia cordata sheds light on the evolution of complex structural features in early angiosperms.

Yahui Huang, Bingyue Zhu, Siqi Hu, Wenbo Shi, Yuxue Liu, Qianhui Lin, Shuo Wang, Jing Yang, Chao Shi

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Animals : an open access journal from MDPI · 2026
    Article
  2. Article
  3. Complete mitochondrial genome ofFrontiers in plant science · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yahui HuangCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.
Bingyue ZhuCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.
Siqi HuCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.
Wenbo ShiCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.
Yuxue LiuCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.
Qianhui LinCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.
Shuo WangCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.
Jing YangCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China. yangjing@qust.edu.cn.
Chao ShiCollege of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China. chaoshi@qust.edu.cn.

Funding

Taishan Scholar Project of Shandong Province No. tsqn202306214Taishan Scholar Project of Shandong Province,China No. tsqn202312205
6 · The paper itself

Abstract

backgroundHouttuynia cordata is a well-known medicinal and edible plant with important economic value. It belongs to the magnoliid clade, a basal lineage of angiosperms. Currently, the limited number of reported mitochondrial genomes from magnoliids severely restricts our understanding of early mitochondrial genome evolution. To address this gap, we present the complete mitochondrial genome of H. cordata.

resultsThe H. cordata mitochondrial genome spans 534,194 bp, and predominantly adopts a bicyclic structure among four possible configurations. It encodes 45 protein-coding genes (PCGs) (40 unique), 29 transfer RNAs (21 unique), and 3 ribosomal RNAs. Repeat analysis revealed significant differences in tandem repeats, dispersed repeats, and simple sequence repeat (SSR) types and densities between the two chromosomes, with Chromosome 1 exhibiting higher repeat density and diversity. Additionally, the H. cordata mitochondrial genome harbors 18 potential mitochondrial plastid DNAs (MTPTs), most of which originate from the inverted repeats (IR) regions of the plastid genome. Variant detection at the individual-level revealed significant heteroplasmy across most regions, while large repeat regions and MTPTs regions exhibited relative conservation. Phylogenetic and collinearity analyses further indicated substantial differences between the mitochondrial genome structure of H. cordata and 15 other magnoliid species, while conserved regions were maintained.

conclusionThis study elucidates the unique evolutionary characteristics of the H. cordata mitochondrial genome and provides valuable insights into its genetics and evolution. Comparative analysis with other magnoliid species reveals both dynamic evolutionary changes and the conservation of mitochondrial genome structure and gene content in early angiosperms.

Indexed as

Evolution, MolecularGenome, MitochondrialHouttuyniaMagnoliopsidaPhylogenyRNA, TransferRNA, TransferEvolutionary analysisHeteroplasmyHomologous recombinationHouttuynia cordataMitochondrial genome

Identifiers

PMID40483439
PMCPMC12144845

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.