Evidence map›Paper›PMID 40483582›Full record

ArticlePlant biotechnology journal2025

Modulating the activity of the APC/C regulator SISAMBA improves the sugar and antioxidant content of tomato fruits.

Perla Novais de Oliveira, Leonardo Perez de Souza, Pedro Boscariol Ferreira, Jean Phillippe Mauxion, Luis Felipe Correa da Silva, Ana Isabela Chang, Marina de Lyra Soriano Saleme, Feng Zhu, Sara Selma García, Herman De Beukelaer and 10 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Perla Novais de OliveiraDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.ORCID https://orcid.org/0000-0001-7749-2697
Leonardo Perez de SouzaMax-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Pedro Boscariol FerreiraDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.ORCID https://orcid.org/0000-0003-1899-443X
Jean Phillippe MauxionINRAE, UMR1332 Biologie du Fruit et Pathologie, Université Bordeaux, Villenave d'Ornon, France.
Luis Felipe Correa da SilvaDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.
Ana Isabela ChangDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.
Marina de Lyra Soriano SalemeDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.
Feng ZhuMax-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Sara Selma GarcíaDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Herman De BeukelaerDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Marina C M Martinsin Press Consultoria e Comunicação Científica, São Paulo, Brazil.
Laise Rosado-SouzaMax-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Lilian Ellen PinoDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.
Norbert BollierINRAE, UMR1332 Biologie du Fruit et Pathologie, Université Bordeaux, Villenave d'Ornon, France.
Lázaro Eustáquio Pereira PeresDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.ORCID https://orcid.org/0000-0002-8761-5934
Klaas VandepoeleDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Alain GoossensDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Nathalie GonzalezINRAE, UMR1332 Biologie du Fruit et Pathologie, Université Bordeaux, Villenave d'Ornon, France.
Alisdair R FernieMax-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.ORCID https://orcid.org/0000-0001-9000-335X
Nubia Barbosa EloyDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz' (ESALQ), University of São Paulo (USP), Piracicaba, Brazil.ORCID https://orcid.org/0000-0001-8380-5063

Funding

Fundação de Amparo à Pesquisa do Estado de São Paulo 2017/10333-8Fundação de Amparo à Pesquisa do Estado de São Paulo 2020/00888-5Fundação de Amparo à Pesquisa do Estado de São Paulo 2021/03212-5Fundação de Amparo à Pesquisa do Estado de São Paulo 2021/06611-8Fundação de Amparo à Pesquisa do Estado de São Paulo 2023/13107-0
6 · The paper itself

Abstract

The Anaphase-Promoting Complex/Cyclosome (APC/C) is an E3 ubiquitin ligase that plays a crucial role in ubiquitin-dependent proteolysis of key cell cycle regulators, which is completed by the 26S proteasome. Previously, SAMBA, a plant-specific regulator of the APC/C, was identified in Arabidopsis as a critical factor controlling organ size through the regulation of cell proliferation. Here, by assessing its role in the crop tomato (Solanum lycopersicum), we confirm that SAMBA is a conserved APC/C regulator in plants and shows additional roles, including the modulation of fruit shape and changes in sugar metabolism. Two slsamba genome-edited lines were produced and characterized, and showed delayed growth, reduced plant size, and altered fruit morphology, which were linked to changes in cell division and expansion. Notably, untargeted metabolomics revealed altered flavonoid profiles, along with elevated Brix values in the fruits, indicating a sweeter taste. Accordingly, transcriptomics uncovered a change in temporal gene expression gradients during early fruit development, correlating with the alterations in sugar metabolism and revealing changes in cell wall biosynthesis genes. This study provides the first evidence of SAMBA's role in regulating fruit development, metabolic content, and ultimately, quality. These important findings offer potential applications for improving the nutritional quality and overall performance of tomatoes.

Indexed as

Anaphase-Promoting Complex-CyclosomeAntioxidantsSolanum lycopersicumSugarsGene Expression Regulation, PlantPlant ProteinsUbiquitin-Protein LigasesAnaphase-Promoting Complex-CyclosomeAntioxidantsPlant ProteinsSugarsUbiquitin-Protein LigasesAPC/CCRISPR/Ca9fruit developmentmetabolic changestomatotranscriptomic analysis

Identifiers

PMID40483582
PMCPMC12392944

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.