Evidence map›Paper›PMID 40490198›Full record

ArticleVirus research2025

Validation of signature molecular profiles of advanced HCV liver disease in hepatocellular carcinoma patients.

In-Woo Park, Hope K Fiadjoe, Tamara Hoteit, Pankaj Chaudhary

Abstract read
In one paragraph

Article in Virus research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

In-Woo ParkDepartment of Microbiology, Immunology, and Genetics, University of North Texas Health Science Center, Fort Worth, Texas, 76107, USA. Electronic address: Inwoo.Park@unthsc.edu.
Hope K FiadjoeDepartment of Microbiology, Immunology, and Genetics, University of North Texas Health Science Center, Fort Worth, Texas, 76107, USA.
Tamara HoteitDepartment of Microbiology, Immunology, and Genetics, University of North Texas Health Science Center, Fort Worth, Texas, 76107, USA.
Pankaj ChaudharyDepartment of Microbiology, Immunology, and Genetics, University of North Texas Health Science Center, Fort Worth, Texas, 76107, USA. Electronic address: Pankaj.Chaudhary@unthsc.edu.

Funding

Engineering simian-compatible HIV-1R21AI179337 · NIAID · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI PARK, IN-WOO · 2024 to 2025
$426k
Emerging role of tumor-derived exosomes in immune modulation and breast cancer health disparity.R21CA283524 · NCI · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI CHAUDHARY, PANKAJ · 2023 to 2024
$370k
NCI NIH HHS R21 CA283524NIAID NIH HHS R21 AI179337
6 · The paper itself

Abstract

Our previous transcriptome analysis revealed that hepatitis C virus (HCV) infection in hepatocytes regulates the expression of numerous hepatocellular genes in a liver disease stage-specific manner. Based on the fold changes at different stages and the known relevant function of the cellular genes with respect to hepatocellular carcinoma (HCC) and through comprehensive examination with various in silico assays, such as heatmap and volcano analysis for the differential expression, the Cancer Genome Atlas - Hepatocellular Carcinoma (TCGA-HCC) analysis, and molecular approaches, such as qRT-PCR, immunoblot analyses, we have chosen the two up-regulated genes - aldo-keto reductase family 1 member B10 (AKR1B10) and hexokinase domain containing 1 (HKDC1), and two down-regulated genes - glycine N-methyltransferase (GNMT) and C-type lectin domain family 4, member M (CLEC4M), and validated their differential expressions of the genes at disparate stages of liver disease with respect to the development of potential therapeutic targets against HCV-mediated hepatocellular carcinoma (HCC). These data suggested that the differentially expressed genes at various stages could serve as prognostic and diagnostic markers for liver disease progression and may also be utilized in developing therapeutic drugs.

Indexed as

Carcinoma, HepatocellularHepacivirusHepatitis CHepatitis C, ChronicLiver NeoplasmsTranscriptomeGene Expression ProfilingGene Expression Regulation, NeoplasticGlycine N-MethyltransferaseHumansMaleGlycine N-MethyltransferaseAKR1B10CLEC4MGNMTHCCHCVHKDC1

Identifiers

PMID40490198
PMCPMC12205558

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.