Evidence map›Paper›PMID 40500699›Full record

ArticleBMC genomics2025

Genomic analysis association of tolerance to heat stress in subtropical Egyptian goats Raised in hot dry environment.

Adel M Aboul-Naga, Alsamman M Alsamman, Sherif Melak, Ahmed E Nassar, Taha H Abdelsabour, Layaly Gamal, Monica Adley, Mohmed H Elshafie

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Adel M Aboul-NagaAnimal Production Research Institute, Agriculture Research Center (ARC), P.O. 12619, Cairo, Egypt. adelmaboulnaga@gmail.com.
Alsamman M AlsammanAgricultural Genetic Engineering Research Institute (AGERI), ARC, Cairo, Egypt. sammanmahmoud@gmail.com.
Sherif MelakAnimal Production Research Institute, Agriculture Research Center (ARC), P.O. 12619, Cairo, Egypt.
Ahmed E NassarInternational Center for Agricultural Research in the Dry Areas (ICARDA), P.O. 12619, Giza, Egypt.
Taha H AbdelsabourAnimal Production Research Institute, Agriculture Research Center (ARC), P.O. 12619, Cairo, Egypt.
Layaly GamalAnimal Production Research Institute, Agriculture Research Center (ARC), P.O. 12619, Cairo, Egypt.
Monica AdleyAgricultural Genetic Engineering Research Institute (AGERI), ARC, Cairo, Egypt.
Mohmed H ElshafieAnimal Production Research Institute, Agriculture Research Center (ARC), P.O. 12619, Cairo, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The study investigated subtropical Egyptian goat populations (382 does) from different hot dry ecological zones (Upper Egypt, Coastal Zone of Western Desert, and New Valley Desert Oasis) to identify genes associated with tolerance to heat stress. Animals were encouraged to walk for 7 km under direct solar radiation from 12:00 to 14:00 pm in July and August (imitating summer grazing on poor pasture under hot dry conditions). Temperature Humidity Index (THI) ranged from 98.6 to 109.3, indicating that the animals were under severe heat stress. Physiological parameters were measured at rest (7:00 am) and after exposure to heat stress (14.00 pm). Animal heat tolerant index (AHTI) was estimated from their response in the four main physiological parameters ranged from (0: high tolerant to 4: low tolerant). The GWAS analysis revealed 90 marker SNPs associated with heat stress in 108 genotypes of Egyptian goat. Ninety markers are found in forty-seven distinct genes distributed across the genome. In terms of the markers (SNPs) that have direct effect on these traits via homozygous alleles, twenty-eight SNPs are connected to heat stress. The snpeff approach revealed that KDM6A, TRPM3, USP54, GLTSCR2, NAALADL2, GATAD2A, CTNNA2, LOC102175876, ZBTB8A, ETNPPL, LRRC43, SNTB1, RPS6KA5, and ARHGAP26 genes influence tolerance to heat stress. These genes offer crucial insights into the biological mechanisms that enhance resilience to elevated temperature conditions. The studied subtropical Egyptian goat breeds showed a high ability to tolerate heat stress and identifying these genomic loci can be utilized to monitor and control tolerance of subtropical goat to heat stress, while maintaining their production performance.

Indexed as

GenomicsGoatsHeat-Shock ResponseThermotoleranceAnimalsEgyptGenome-Wide Association StudyGenotypeHot TemperaturePolymorphism, Single NucleotideGenomic analysisGWASHeat stress toleranceSubtropical egyptian goat

Identifiers

PMID40500699
PMCPMC12153181

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.