Evidence map›Paper›PMID 40521617›Full record

ArticleProtein science : a publication of the Protein Society2025

Apo-state structure of the metabotropic glutamate receptor 5 transmembrane domain obtained using a photoswitchable ligand.

Yasushi Kondo, Caitlin Hatton, Robert Cheng, Matilde Trabuco, Hannah Glover, Quentin Bertrand, Fabienne Stierli, Hans-Peter Seidel, Thomas Mason, Sivathmika Sarma and 6 more

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Structural Mechanism of an Efficacy Photoswitch Targeting the βAngewandte Chemie (International ed. in English) · 2026
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Yasushi KondoPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.ORCID 0000-0003-2131-575X
Caitlin HattonInstitute for Nanostructure and Solid-State Physics, Hamburg, Germany.
Robert ChengLeadXpro Biotech AG, Park Innovaare, Villigen PSI, Switzerland.
Matilde TrabucoLeadXpro Biotech AG, Park Innovaare, Villigen PSI, Switzerland.
Hannah GloverPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.
Quentin BertrandPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.
Fabienne StierliPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.
Hans-Peter SeidelPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.
Thomas MasonPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.
Sivathmika SarmaPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.
Friedjof TellkampMax Planck Institute for the Structure and Dynamics of Matter, Hamburg, Germany.
Michal KepaPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.
Florian DworkowskiPSI Center for Photon Science, Laboratory for Synchrotron Radiation and Femtochemistry, Paul Scherrer Institute, Villigen PSI, Switzerland.
Pedram MehrabiInstitute for Nanostructure and Solid-State Physics, Hamburg, Germany.
Michael HennigLeadXpro Biotech AG, Park Innovaare, Villigen PSI, Switzerland.
Joerg StandfussPSI Center for Life Sciences, Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.

Funding

Deutsche Forschungsgemeinschaft 451079909Innosuisse - Schweizerische Agentur für Innovationsförderung 42711.1 IP-LSSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 310030_207462Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung CRSII5_213507
6 · The paper itself

Abstract

Metabotropic glutamate receptor 5 (mGlu5) is implicated in various neurodegenerative disorders, making it an attractive drug target. Although several ligand-bound crystal structures of mGlu5 exist, their apo-state crystal structure remains unknown. Here, we study mGlu5 structural changes using the photochemical affinity switch, alloswitch-1, in combination with time-resolved freeze-trapping methods. By X-ray crystallography, we demonstrated that isomerizing alloswitch-1 leads to its release from the binding pocket within a few seconds. The apo structure, determined at a resolution of 2.9 Å, is more comparable to the inactive state than to the active state. Our approach presents an accessible alternative to time-resolved serial crystallography for capturing thermodynamically stable transient intermediates. The mGlu5 apo-structure provides molecular insights into the ligand-free allosteric pocket, which can guide the design of new allosteric modulators.

Indexed as

ApoproteinsReceptor, Metabotropic Glutamate 5Binding SitesCrystallography, X-RayHumansLigandsModels, MolecularProtein ConformationProtein DomainsApoproteinsLigandsReceptor, Metabotropic Glutamate 5apo‐stateGPCRlight activationX‐ray crystallography

Identifiers

PMID40521617
PMCPMC12168131

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.