Evidence map›Paper›PMID 40524091›Full record

ArticleArchives of virology2025

The full‑length genome sequence of a novel polymycovirus infecting the phytopathogenic fungus Botryosphaeria dothidea.

Shunpei Xie, Yanfen Wang, Fengyue Gong, Haiyan Wu, Haiqiang Li, Qinzhou Ma, Yashuang Guo, Yuehua Geng, Bingshan Liu, Meng Zhang

Abstract read
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In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Shunpei Xie *College of Plant Protection, Henan Agricultural University, Zhengzhou, 450002, China.
Yanfen Wang *School of Resources and Environment, Henan Institute of Science and Technology, Xinxiang, 453003, China.
Fengyue GongCollege of Plant Protection, Henan Agricultural University, Zhengzhou, 450002, China.
Haiyan WuAnalytical Instrument Center, Henan Agricultural University, Zhengzhou, 450002, China.
Haiqiang LiInstitute of Plant Protection, Xinjiang Academy of Agricultural Sciences, Urumqi, 830091, China.
Qinzhou MaCollege of Plant Protection, Henan Agricultural University, Zhengzhou, 450002, China.
Yashuang GuoCollege of Plant Protection, Henan Agricultural University, Zhengzhou, 450002, China.
Yuehua GengCollege of Plant Protection, Henan Agricultural University, Zhengzhou, 450002, China.
Bingshan LiuAnalytical Instrument Center, Henan Agricultural University, Zhengzhou, 450002, China. liu_bingshan@126.com.
Meng ZhangCollege of Plant Protection, Henan Agricultural University, Zhengzhou, 450002, China. zm2006@126.com.ORCID http://orcid.org/0000-0003-1941-1136

Funding

Henan Agricultural University High-level Talent Special Support Fund Project 30501502National Natural Science Foundation of China 32400008Natural Science Foundation of Henan 232300420264 & 242300420481Xinjiang Apple Industry Technology System-Disease Prevention XJLGCYJSTX04-2024-11
6 · The paper itself

Abstract

Here, a novel dsRNA virus belonging to the family Polymycoviridae was identified in the phytopathogenic fungal strain B. dothidea ZM200473 and tentatively named "Botryosphaeria dothidea polymycovirus 2" (BdPmV2). The genome of BdPmV2 consists of five genomic dsRNA segments, ranging in size from 1224 to 2407 bp, each containing an open reading frame (ORF). ORF1 encodes a conserved RNA-dependent RNA polymerase (RdRP) consisting of 763 amino acids (aa) with a molecular mass (Mr) of 84.03 kDa, ORF3 encodes a putative methyltransferase (Met) consisting of 627 amino acids (aa) with an Mr of 68.41 kDa, ORF4 encodes a P-A-S-rich protein that serves as a coat protein (CP) consisting of 261 amino acids (aa) with an Mr of 27.60 kDa. ORF2 and ORF5 encode putative proteins with unknown functions, consisting of 697 amino acids (aa) with an Mr of 76.49 kDa and 323 amino acids (aa) with an Mr of 33.92 kDa, respectively. BLASTp analysis revealed that the RdRP protein of BdPmV2 had the highest similarity (56.52% identity) to that of a virus previously identified as "Aspergillus fumigatus polymycovirus 1". Phylogenetic analysis based on RdRP aa sequences indicated that BdPmV2 is a new member of the family Polymycoviridae.

Indexed as

AscomycotaDouble Stranded RNA VirusesFungal VirusesGenome, ViralRNA VirusesAmino Acid SequenceOpen Reading FramesPhylogenyPlant DiseasesRNA-Dependent RNA PolymeraseRNA, ViralViral ProteinsWhole Genome SequencingRNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

PMID40524091

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.