Evidence map›Paper›PMID 40527919›Full record

ArticleScientific data2025

A chromosome-level genome assembly of the Hermonassa cecilia (Lepidoptera: Noctuidae).

Chao Wu, Xinyue Liang, Chengyue Xian, Lei Zhang, Zhiqiang Zhang, Yao Tan, Jingang Liang, Yutao Xiao

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chao Wu *Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Gene Editing Technologies (Hainan), Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.ORCID 0000-0003-4163-5179
Xinyue Liang *Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Gene Editing Technologies (Hainan), Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
Chengyue Xian *Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Gene Editing Technologies (Hainan), Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
Lei ZhangShenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Gene Editing Technologies (Hainan), Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.ORCID 0000-0003-0809-5836
Zhiqiang ZhangKey Laboratory of Grassland Resources, Ministry of Education, Inner Mongolia Agricultural University, Hohhot, 010019, China. zhangzq198909@imau.edu.cn.
Yao TanKey Laboratory of Grassland Resources, Ministry of Education, Inner Mongolia Agricultural University, Hohhot, 010019, China. 850310.tanhuaf4@163.com.
Jingang LiangDevelopment Center of Science and Technology, Ministry of Agriculture and Rural Affairs, Beijing, 100176, China. liangjingang@agri.gov.cn.
Yutao XiaoShenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Gene Editing Technologies (Hainan), Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China. xiaoyutao@caas.cn.ORCID 0000-0003-3203-9375

Funding

National Natural Science Foundation of China (National Science Foundation of China) 3237170929
6 · The paper itself

Abstract

Hermonassa cecilia is a Lepidoptera pest primarily distributed in East Asia, belonging to the subfamily Noctuinae, which includes species that typically target and damage the underground parts of plants. However, there is limited information available on the life history and genomic resources of H. cecilia to date. In this study, we present a high-quality reference genome of H. cecilia generated using PacBio sequencing and Hi-C methods. The assembled genome size is 626.10 Mb, with a N50 of 21.00 Mb, and the contigs were mapped onto 31 chromosomes. BUSCO analysis indicated high genome completeness, with a score of 99.40%. We identified 281.45 Mb of repetitive sequences, which account for 44.21% of the genome, and annotated 22,662 protein-coding genes, 89.29% of which had functional annotations. This study represents the first assembly and annotation of the H. cecilia genome, providing a valuable resource for understanding its biological characteristics and offering significant potential for comparative genomics within the Noctuinae subfamily.

Indexed as

Chromosomes, InsectGenome, InsectMothsAnimalsMolecular Sequence Annotation

Identifiers

PMID40527919
PMCPMC12174355

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.