Evidence map›Paper›PMID 40536728›Full record

ArticleDermatology and therapy2025

Integrative Proteomics and Genomics Identify Novel Biomarkers and Therapeutic Targets in Vitiligo via Mendelian Randomization.

Chenjue Yan, Ling Jiang, Yibo Hu, Ting You, Jing Chen, Songjiang Wu

Abstract read
In one paragraph

Article in Dermatology and therapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Chenjue Yan *Department of Dermatology, the First Affiliated Hospital, Hengyang Medical College, University of South China, Hengyang, Hunan, 421001, People's Republic of China.
Ling Jiang *Department of Dermatology, the Third Xiangya Hospital, Central South University, 138 Tongzipo Road, Changsha,, Hunan, 410013, People's Republic of China.
Yibo HuClinical Research Center, the Second Xiangya Hospital, Central South University, 139 Renmin Road, Changsha, Hunan, 410011, People's Republic of China.
Ting YouDepartment of Emergency, the First Affiliated Hospital, Hengyang Medical College, University of South China, Hengyang, Hunan, 421001, People's Republic of China.
Jing ChenDepartment of Dermatology, the Third Xiangya Hospital, Central South University, 138 Tongzipo Road, Changsha,, Hunan, 410013, People's Republic of China.
Songjiang WuDepartment of Dermatology, the First Affiliated Hospital, Hengyang Medical College, University of South China, Hengyang, Hunan, 421001, People's Republic of China. 574238803@qq.com.ORCID http://orcid.org/0000-0001-9608-9828

Funding

Natural Science Foundation of Hunan Province 2024JJ5360Natural Science Foundation of Hunan Province 2025JJ60723
6 · The paper itself

Abstract

introductionGiven that the proteome is a major source of therapeutic targets, we conducted a proteome-wide Mendelian randomization (MR) combined with transcriptome sequencing analysis to identify candidate protein markers and therapeutic targets for vitiligo.

methodsBased on protein quantitative trait loci (pQTLs) and genetic associations with vitiligo obtained from the European Bioinformatics Institute (EBI) database (60 vitiligo cases and 402,672 controls), and the UK Biobank (95 vitiligo cases and 337,064 controls), bidirectional MR and colocalization analyses identified genetically predicted levels of nine proteins collectively linked to vitiligo risk. Based on the RNA-seq data and single-cell RNA-seq data of vitiligo, bioinformatics analysis and model prediction of genes associated with vitiligo progression evaluated the relationship between candidate core proteins and the development of vitiligo.

resultsFour proteins (KLF4, MYL4, TNFRSF13C, TNFSF13B) were associated with lower vitiligo risk, while five proteins (ALPI, CDH1, ITGB1, SERPINH1, TNFSF10) were linked to higher risk. Of these, three proteins (KLF4, TNFRSF13C, and TNFSF10) were high priority with the most convincing evidence. Bioinformatics analysis and model prediction of genes associated with vitiligo progression showed these three protein-coding genes were significantly associated with vitiligo occurrence, and their functions were related to cell cycle, apoptosis, oxidative stress, inflammatory response, and immune infiltration. Mechanistically, the expression of these key candidate molecules was regulated by various miRNAs and transcription factors. The druggability assessment and molecular docking identified some drugs targeting these proteins, such as APTO-2535 and butyric acid.

conclusionKLF4, TNFRSF13C, and TNFSF10 may be involved in regulating the occurrence and development of vitiligo, providing potential targets for improving the diagnosis and treatment of vitiligo.

Indexed as

ColocalizationGenome-wide association studiesMendelian randomizationProtein quantitative trait lociVitiligo

Identifiers

PMID40536728
PMCPMC12256375

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.