Evidence map›Paper›PMID 40544175›Full record

ArticleMolecular biology reports2025

Evaluation of aptamers binding ability towards bovine X-specific sperm.

Vanya Bhushan, Abhishek Parashar, Nimai Charan Mahanandia, Tushar Kumar Mohanty, Jai Kumar Kaushik, Sudarshan Kumar, Ashok Kumar Mohanty

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Article in Molecular biology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Vanya Bhushan *Animal Biotechnology Centre, National Dairy Research Institute (NDRI), Karnal, 132001, India.
Abhishek Parashar *Animal Biotechnology Centre, National Dairy Research Institute (NDRI), Karnal, 132001, India.
Nimai Charan MahanandiaAnimal Biotechnology Centre, National Dairy Research Institute (NDRI), Karnal, 132001, India.
Tushar Kumar MohantyAnimal Reproduction, National Dairy Research Institute (NDRI), Karnal, 132001, India.
Jai Kumar KaushikAnimal Biotechnology Centre, National Dairy Research Institute (NDRI), Karnal, 132001, India.
Sudarshan KumarAnimal Biotechnology Centre, National Dairy Research Institute (NDRI), Karnal, 132001, India. kumarsudershan@gmail.com.
Ashok Kumar MohantyAnimal Biotechnology Centre, National Dairy Research Institute (NDRI), Karnal, 132001, India. ashokmohanty1@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSemen sexing is a much sought-after technique in the livestock industry. Current research focuses on selecting DNA aptamers (Synthetic single-stranded DNA) against X-sorted sperm. METHODS AND

resultsFour rounds of Cell-SELEX were performed, where the DNA aptamer library was incubated with X-sorted semen. Subsequently, affinity-depicting aptamers were sequenced. Fourteen out of thirty-four identified sequences were tested for specificity towards X-sorted sperm. The magnetic bead-based experiment revealed that the aptamers interacted preferentially with the acrosome region (sperm head) of sperm. We investigated the specificity of aptamers for X-spermatozoa by conducting real-time PCR assays targeting sex-specific genes. Aptamers X8, X19, X22 & X27 exhibited higher affinity for X-sorted sperm than Y in bovine semen. Western blot analysis showed an interaction between the aptamer and sperm protein at 35 kDa. The results underwent further analysis using in-gel mass spectrometry (MS) that predicted SPACA1 protein as the potential/putative aptamer binding protein on the sperm surface. Competitive western blot further confirmed aptamers' differential specificity for X-sperm.

conclusionsThe current work helps in creating new knowledge for the separation of Y-chromosome-bearing sperm from XY sperm populations that have the potential to produce good-quality cattle (cows). The work also generates proof of concept (POC) of using aptamers, which is cost-effective and could be used in sorting sex-specific spermatozoa without causing any ill effect on sperm.

Indexed as

Aptamers, NucleotideSex Determination AnalysisSex PreselectionSpermatozoaX ChromosomeAnimalsCattleMaleSELEX Aptamer TechniqueY ChromosomeAptamers, NucleotideAptamersCell SELEXMagnetic beadsMass spectroscopySPACA1 proteinX-sorted spermXY sperm

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.