Evidence mapPaperPMID 40565205Full record

ArticleInternational journal of molecular sciences2025

Prediction of Extraintestinal Manifestations in Inflammatory Bowel Disease Using Clinical and Genetic Variables with Machine Learning in a Latin IBD Group.

Tamara Pérez-Jeldres, Paula Reyes-Pérez, Patricio Gonzalez-Hormazabal, Cristóbal Avendano, Roberto Segovia Melero, Lorena Azocar, Veronica Silva, Andres De La Vega, Elizabeth Arriagada, Elisa Hernandez and 9 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Tamara Pérez-JeldresDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Paula Reyes-PérezLaboratorio Internacional de Investigación Sobre el Genoma Humano, University Nacional Autónoma de Mexico, Mexico 76230, Mexico.
Patricio Gonzalez-HormazabalPrograma de Genética Humana, Facultad de Medicina, Instituto de Ciencias Biomédicas (ICBM), Santiago 8380453, Chile.
Cristóbal AvendanoDepartmento de Ciencias de la Computación, Pontificia University Católica de Chile, Santiago 7820436, Chile.
Roberto Segovia MeleroDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Lorena AzocarDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Veronica SilvaDepartmento de Gastroenterología, Hospital san Borja Arriaran, Santiago 8360160, Chile.
Andres De La VegaDepartmento de Gastroenterología, Hospital san Borja Arriaran, Santiago 8360160, Chile.
Elizabeth ArriagadaDepartmento de Gastroenterología, Hospital san Borja Arriaran, Santiago 8360160, Chile.
Elisa HernandezDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Nataly AguilarDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Carolina Pavez-OvalleDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Cristian Hernández-RochaDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Roberto CandiaDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.ORCID 0000-0003-1856-7737
Juan Francisco MiquelDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Manuel Alvarez-LobosDepartmento de Gastroenterología, Pontificia University Católica de Chile, Santiago 8330024, Chile.
Ivania ValdesDepartmento de Enfermedades Respiratorias, Escuela de Medicina, Pontificia University Católica de Chile, Santiago 8330024, Chile.ORCID 0009-0008-4803-1291
Alejandra Medina-RiveraLaboratorio Internacional de Investigación Sobre el Genoma Humano, University Nacional Autónoma de Mexico, Mexico 76230, Mexico.
Maria Leonor BustamantePrograma de Genética Humana, Facultad de Medicina, Instituto de Ciencias Biomédicas (ICBM), Santiago 8380453, Chile.ORCID 0000-0001-9071-2463

Funding

Agencia Nacional de Investigación y Desarrollo 11220147Agencia Nacional de Investigación y Desarrollo 399564Agencia Nacional de Investigación y Desarrollo 698106
6 · The paper itself

Abstract

Extraintestinal manifestations (EIMs) significantly increase morbidity in inflammatory bowel disease (IBD) patients. In this study, we examined clinical and genetic factors associated with EIMs in 414 Latin IBD patients, utilizing machine learning for predictive modeling. In our IBD group (314 ulcerative colitis (UC) and 100 Crohn's disease (CD) patients), EIM presence was assessed. Clinical differences between patients with and without EIMs were analyzed using Chi-square and Mann-Whitney U tests. Based on the genetic data of 232 patients, we identified variants linked to EIMs, and the polygenic risk score (PRS) was calculated. A machine learning approach based on logistic regression (LR), random forest (RF), and gradient boosting (GB) models was employed for predicting EIMs. EIMs were present in 29% (120/414) of patients. EIM patients were older (52 vs. 45 years,

Indexed as

Colitis, UlcerativeCrohn DiseaseInflammatory Bowel DiseasesMachine LearningAdultFemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedPolymorphism, Single NucleotideRisk Factorsextraintestinal manifestationgenetic variantsinflammatory bowel disease

Identifiers

PMID40565205
PMCPMC12192962

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.