Evidence map›Paper›PMID 40569077›Full record

ArticlemBio2025

Host-specific adaptation in

Dilay Hazal Ayhan, Serena Abbondante, Domingo Martínez-Soto, Siyuan Wu, Ricardo Rodriguez-Vargas, Shira Milo, Katherine Rickelton, Vista Sohrab, Shunsuke Kotera, Tsutomu Arie and 7 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Dilay Hazal Ayhan1Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.ORCID 0000-0002-0497-3294
Serena AbbondantePhysiology and Biophysics and Ophthalmology, University of California, Irvine, California, USA.
Domingo Martínez-SotoDepartment of Microbiology, Centro de Investigación Científica y Educación Superior de Ensenada (CICESE), Ensenada, Baja California, Mexico.
Siyuan Wu1Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Ricardo Rodriguez-VargasDepartment of Microbiology, Centro de Investigación Científica y Educación Superior de Ensenada (CICESE), Ensenada, Baja California, Mexico.
Shira Milo1Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Katherine Rickelton1Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Vista Sohrab1Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Shunsuke KoteraLaboratory of Plant Pathology, Graduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo, Japan.
Tsutomu ArieLaboratory of Plant Pathology, Graduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo, Japan.ORCID 0000-0002-4604-6608
Michaela Ellen MarshallPhysiology and Biophysics and Ophthalmology, University of California, Irvine, California, USA.
Marina Campos RochaThe Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Jerusalem, Israel.
Sajeet HaridasUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Igor V GrigorievUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Neta ShlezingerThe Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Jerusalem, Israel.
Eric PearlmanPhysiology and Biophysics and Ophthalmology, University of California, Irvine, California, USA.
Li-Jun Ma1Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.ORCID 0000-0002-2733-3708

Funding

Biotechnology Training Program in Applied Life SciencesT32GM135096 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI Jeanne Ann Hardy, Ashish A. Kulkarni · 2020 to 2026
$3.9M
Identify virulence factors that facilitate Fusarium keratitisR01EY030150 · NEI · UNIVERSITY OF MASSACHUSETTS AMHERST · PI MA, LI-JUN · 2019 to 2023
$1.9M
Burroughs Wellcome Fund BWF-1014893DOE | NNSA | LDRD | Krell | Department of Energy National Nuclear Security Administration Laboratory Residency Graduate Fellowship (DOE NNSA LRGF) DE-AC02-05CH11231HHS | NIH | All of Us Research Program (All of Us NIH) T32 GM135096, R01EY030150, IOS-165241NEI NIH HHS R01 EY030150NIGMS NIH HHS T32 GM135096
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Adaptation, PhysiologicalChromosomes, FungalFusariosisFusariumHost SpecificityPlant DiseasesSolanum lycopersicumAnimalsAntifungal AgentsHumansKeratitisMiceAntifungal Agentsaccessory chromosomescomparative genomicscorneal infectioncross-kingdom fungal pathogenFusarium oxysporumtomato vascular wilt

Identifiers

PMID40569077
PMCPMC12345182

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.