Evidence map›Paper›PMID 40571787›Full record

ArticleEMBO reports2025

BZR1 promotes pluripotency acquisition and callus development through direct regulation of ARF7 and ARF19.

Thomas Ammitsøe, Elise Ebstrup, Noel Blanco-Touriñán, Julie Hansen, Christian S Hardtke, Morten Petersen, Eleazar Rodriguez

Abstract read
In one paragraph

Article in EMBO reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Origin and evolution ofHorticulture research · 2026
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Thomas Ammitsøe *Section for Functional Genomics, Department of Biology, University of Copenhagen, 2200, Copenhagen, Denmark.ORCID 0000-0001-9170-6567
Elise Ebstrup *Section for Functional Genomics, Department of Biology, University of Copenhagen, 2200, Copenhagen, Denmark.ORCID 0000-0002-6191-8873
Noel Blanco-TouriñánDepartment of Plant Molecular Biology, University of Lausanne, CH-1015, Lausanne, Switzerland.
Julie HansenSection for Functional Genomics, Department of Biology, University of Copenhagen, 2200, Copenhagen, Denmark.
Christian S HardtkeDepartment of Plant Molecular Biology, University of Lausanne, CH-1015, Lausanne, Switzerland.ORCID 0000-0003-3203-1058
Morten PetersenDepartment of Plant and Environmental Sciences, University of Copenhagen, 1871, Frederiksberg, Denmark. morten.petersen@plen.ku.dk.ORCID 0000-0002-3035-5991
Eleazar RodriguezSection for Functional Genomics, Department of Biology, University of Copenhagen, 2200, Copenhagen, Denmark. eleazar.rodriguez@bio.ku.dk.ORCID 0000-0002-3641-4980

Funding

Danish Research Agency DFF1- 1032-00249BNovo Nordisk Fonden (NNF) NNF190C0055222
6 · The paper itself

Abstract

Plants have the remarkable ability to regenerate whole organisms through the formation of pluripotent cell masses from somatic cells. Cellular programs leading to fate change resemble lateral root (LR) formation and are chiefly regulated by auxin. Brassinosteroid signaling also plays an important role in LR formation, but little is known about the direct link between auxin and brassinosteroid components, such as BZR1 and BES1, in pluripotency acquisition. Here we show that gain-of-function mutants bzr1-D and bes1-D exhibit altered callus formation, yet disruption of these transcription factors does not cause major changes to callus formation or de novo organogenesis. Moreover, our data reveal that BZR1 displays enhanced expression in callus tissue and directly binds to the promoters of ARF7 and ARF19, two master pluripotency regulators, leading to their enhanced transcription. Remarkably, callus formation is abrogated in bzr1-D upon disruption of these ARFs, emphasizing that the callus formation via BZR1 depends on these auxin signaling components. In conclusion, we depict a link between, ARF7, ARF19, and BZR1 in promoting pluripotency acquisition, portraying BZR1 as a major supporting factor in callus formation.

Indexed as

ArabidopsisArabidopsis ProteinsDNA-Binding ProteinsGene Expression Regulation, PlantNuclear ProteinsTranscription FactorsIndoleacetic AcidsMutationPromoter Regions, GeneticProtein BindingSignal TransductionArabidopsis ProteinsARF19 protein, ArabidopsisARF7 protein, ArabidopsisBZR1 protein, ArabidopsisDNA-Binding ProteinsIndoleacetic AcidsNuclear ProteinsTranscription FactorsARFsBZR1CallusPluripotencyTranscriptional Regulation

Identifiers

PMID40571787
PMCPMC12287390

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.