Evidence map›Paper›PMID 40587455›Full record

ArticleJournal of visualized experiments : JoVE2025

High-throughput Flow-cytometry Measurement of Cellular Mechanotype Based on Rupture and Delivery of DNA Tension Probes into Cells.

Matthew R Pawlak, Wendy R Gordon

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Matthew R PawlakCollege of Biological Sciences, University of Minnesota.
Wendy R GordonCollege of Biological Sciences, University of Minnesota; wrgordon@umn.edu.

Funding

Mechanism and modulation of Amyloid Precursor Protein proteolysisR35GM119483 · NIGMS · UNIVERSITY OF MINNESOTA · PI WENDY RYAN GORDON · 2016 to 2026
$4.6M
NIGMS NIH HHS R35 GM119483
6 · The paper itself

Abstract

Mechanical forces guide many critical cellular processes, and cellular mechanical phenotype, or mechanotype, is disrupted in many diseases. The most widely used method to quantify cellular forces is traction force microscopy, which traditionally captures forces that cells exert on their surroundings by high-resolution microscopy of cells deforming elastic substrates containing fluorescent beads, deflecting microposts, or altering the conformation of immobilized molecular tension sensors. We present here a high-throughput method to measure relative cellular traction forces using established DNA tension probes and quantified via flow cytometry. There are five overall steps involved in this method described below. First, expression and purification of the high-affinity integrin ligand echistatin fused to a DNA-linking HUH-tag; second, preparation of the DNA duplex probes containing reporters and ligand; third, surface preparation and immobilization of probes; fourth, execution of the "Rupture and Deliver" tension-gauge-tether experiment and flow readout. Finally, we will describe data analysis and interpretation of experimental results.

Indexed as

DNA ProbesFlow CytometryHigh-Throughput Screening AssaysDNAHumansDNADNA Probes

Identifiers

PMID40587455
PMCPMC12798703

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.