Evidence map›Paper›PMID 40595593›Full record

ArticleNature communications2025

DNA methylation protects cancer cells against senescence.

Xiaoying Chen, Kosuke Yamaguchi, Brianna Rodgers, Delphine Goehrig, David Vindrieux, Xavier Lahaye, Matthieu Nolot, Laure Ferry, Sophie Lanciano, Nadine Martin and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
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  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Xiaoying Chen *Université Paris Cité, CNRS, Epigenetics and Cell Fate, Paris, France.ORCID http://orcid.org/0000-0002-5548-3973
Kosuke Yamaguchi *Université Paris Cité, CNRS, Epigenetics and Cell Fate, Paris, France. yamako0801@icloud.com.ORCID http://orcid.org/0000-0003-2926-9444
Brianna RodgersUniversité Paris Cité, CNRS, Epigenetics and Cell Fate, Paris, France.
Delphine GoehrigEquipe Labellisee La Ligue Contre Le Cancer, Centre de Recherche en Cancerologie de Lyon, Inserm U1052, CNRS UMR 5286, Centre Leon Berard, Université de Lyon, Lyon, France.
David VindrieuxEquipe Labellisee La Ligue Contre Le Cancer, Centre de Recherche en Cancerologie de Lyon, Inserm U1052, CNRS UMR 5286, Centre Leon Berard, Université de Lyon, Lyon, France.
Xavier LahayeInstitut Curie, PSL Research University, Paris, France.ORCID http://orcid.org/0000-0001-7124-1707
Matthieu NolotUniversité Paris Cité, CNRS, Epigenetics and Cell Fate, Paris, France.ORCID http://orcid.org/0009-0003-4727-8640
Laure FerryUniversité Paris Cité, CNRS, Epigenetics and Cell Fate, Paris, France.
Sophie LancianoUniversity Cote d'Azur, INSERM, CNRS, Institute for Research on Cancer and Aging of Nice (IRCAN), Nice, France.
Nadine MartinEquipe Labellisee La Ligue Contre Le Cancer, Centre de Recherche en Cancerologie de Lyon, Inserm U1052, CNRS UMR 5286, Centre Leon Berard, Université de Lyon, Lyon, France.
Pierre DubusDepartment of Tumor Biology, Centre Hospitalier Universitaire de Bordeaux, Bordeaux, France.
Fumihito MiuraLife Science Data Research Center, Graduate School of Frontier Sciences, the University of Tokyo, Chiba, Japan.
Takashi ItoDepartment of Biochemistry, Kyushu University Graduate School of Medical Sciences, Fukuoka, Fukuoka, Japan.ORCID http://orcid.org/0000-0001-6097-2803
Gael CristofariUniversity Cote d'Azur, INSERM, CNRS, Institute for Research on Cancer and Aging of Nice (IRCAN), Nice, France.ORCID http://orcid.org/0000-0001-5620-3091
Nicolas ManelInstitut Curie, PSL Research University, Paris, France.ORCID http://orcid.org/0000-0002-1481-4430
Masato T KanemakiDepartment of Chromosome Science, National Institute of Genetics, Research Organization of Information and Systems (ROIS), Mishima, Shizuoka, Japan.ORCID http://orcid.org/0000-0002-7657-1649
David BernardEquipe Labellisee La Ligue Contre Le Cancer, Centre de Recherche en Cancerologie de Lyon, Inserm U1052, CNRS UMR 5286, Centre Leon Berard, Université de Lyon, Lyon, France.ORCID http://orcid.org/0000-0002-1557-2074
Pierre-Antoine DefossezUniversité Paris Cité, CNRS, Epigenetics and Cell Fate, Paris, France. pierre-antoine.defossez@cnrs.fr.ORCID http://orcid.org/0000-0002-6463-9263

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-23-CE12-0015-01Fondation pour la Recherche Médicale (Foundation for Medical Research in France) EQU202503019988Fondation pour la Recherche Médicale (Foundation for Medical Research in France) FDT202404018544Institut National Du Cancer (French National Cancer Institute) INCA_18350
6 · The paper itself

Abstract

Inhibitors of DNA methylation such as 5-aza-deoxycytidine are widely used in experimental and clinical settings. However, their mechanism of action is such that DNA damage inevitably co-occurs with loss of DNA methylation, making it challenging to discern their respective effects. Here we deconvolute the effects of decreased DNA methylation and DNA damage on cancer cells, by using degron alleles of key DNA methylation regulators. We report that cancer cells with decreased DNA methylation-but no DNA damage-enter cellular senescence, with G1 arrest, SASP expression, and SA-β-gal positivity. This senescence is independent of p53 and Rb, but involves p21, which is cytoplasmic and inhibits apoptosis, and cGAS, playing a STING-independent role in the nucleus. Xenograft experiments show that tumor cells can be made senescent in vivo by decreasing DNA methylation. These findings reveal the intrinsic effects of loss of DNA methylation in cancer cells and have practical implications for future therapeutic approaches.

Indexed as

Cellular SenescenceDNA MethylationNeoplasmsAnimalsApoptosisCell Line, TumorCyclin-Dependent Kinase Inhibitor p21DNA DamageFemaleHumansMiceMice, NudeNucleotidyltransferasesSenescence-Associated Secretory PhenotypeTumor Suppressor Protein p53Cyclin-Dependent Kinase Inhibitor p21NucleotidyltransferasesTumor Suppressor Protein p53

Identifiers

PMID40595593
PMCPMC12216915

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.