Evidence map›Paper›PMID 40596128›Full record

ArticleScientific reports2025

Variations in oral health outcomes and mycobiome composition among COVID-19 convalescents.

Katarzyna Talaga-Ćwiertnia, Agnieszka Sroka-Oleksiak, Barbara Brzychczy-Sroka, Artur Gurgul, Elżbieta Zarzecka-Francica, Agnieszka Krawczyk, Tomasz Gosiewski, Wojciech Ostrowski, Janusz Kąkol, Joanna Zarzecka and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Katarzyna Talaga-ĆwiertniaDepartment of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland.
Agnieszka Sroka-OleksiakDepartment of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland.
Barbara Brzychczy-SrokaDepartment of Conservative Dentistry with Endodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.
Artur GurgulFaculty of Veterinary Medicine, The University of Agriculture in Kraków, Kraków, Poland.
Elżbieta Zarzecka-FrancicaDepartment of Prosthodontics and Orthodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.
Agnieszka KrawczykDepartment of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland.
Tomasz GosiewskiMicrobiome Research Laboratory, Department of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland.
Wojciech OstrowskiDepartment of Conservative Dentistry with Endodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.
Janusz KąkolUniversity Hospital in Cracow, Temporary COVID Ward No. 1, Kraków, Poland.
Joanna ZarzeckaDepartment of Conservative Dentistry with Endodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.
Monika Brzychczy-WłochDepartment of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland. m.brzychczy-wloch@uj.edu.pl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The link between gut microbiota and COVID-19 has been previously established, but the role of the oral fungal microbiota in this context remains underexplored. This study aimed to characterize the oral mycobiome of COVID-19 convalescents. Saliva samples were collected from three groups: COVID-19 patients treated with antibiotics (group I), COVID-19 patients without antimicrobial treatment (group II), and healthy volunteers (group III) from the University Hospital and from the University Dental Clinic in Kraków. The samples were analyzed using next-generation sequencing (NGS) targeting the ITS-1 region. Statistically significant differences in dental indices (Plaque Index-PI, Bleeding on Probing-BOP, Winkel Tongue Coating Index-WTCI) were observed between the convalescent groups (I and II) and the control group (III). At the phylum level, significant alpha diversity differences were noted across all groups. At the genus level, alpha diversity was significant for all tested indices. Beta diversity analysis revealed no significant differences between groups I and II at either the phylum or genus levels (p > 0.05). The most abundant genera were Candida and Malassezia, with Candida being more prevalent in group I (88.11%) compared to group II (78.20%) and group III (45.81%). Linear discriminant analysis (LDA) indicated Candida as overrepresented in group I, and Malassezia as a characteristic marker in group II. Additionally, we observed the higher evenness of mold species like Aspergillus and Penicillium in the control group compared to the COVID-19 convalescents. COVID-19 convalescents, particularly those treated with antibiotics, exhibited worse oral condition compared to healthy controls, with Candida overgrowth strongly associated with antibiotic use.

Indexed as

COVID-19MycobiomeOral HealthAdultAnti-Bacterial AgentsFemaleFungiHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedMouthSalivaSARS-CoV-2Anti-Bacterial AgentsCOVID-19MycobiomeNext generation sequencing (NGS)Oral fungiOral mycobiotaSARS-CoV-2 recovered patients

Identifiers

PMID40596128
PMCPMC12219026

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.