Evidence mapPaperPMID 40596187Full record

ArticleScientific reports2025

Machine learning unveils hypoxia-immune gene hub for clinical stratification of thyroid-associated ophthalmopathy.

Lu Chen, Sha Wang, Jinwei Wang, Bei Xu, Jia Tan, Xiaobo Xia

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lu ChenEye Center of Xiangya Hospital, Central South University, Changsha, 410008, Hunan, People's Republic of China.
Sha WangEye Center of Xiangya Hospital, Central South University, Changsha, 410008, Hunan, People's Republic of China.
Jinwei WangEye Center of Xiangya Hospital, Central South University, Changsha, 410008, Hunan, People's Republic of China.
Bei XuEye Center of Xiangya Hospital, Central South University, Changsha, 410008, Hunan, People's Republic of China.
Jia TanEye Center of Xiangya Hospital, Central South University, Changsha, 410008, Hunan, People's Republic of China. tanjiaxy@csu.edu.cn.
Xiaobo XiaEye Center of Xiangya Hospital, Central South University, Changsha, 410008, Hunan, People's Republic of China. xbxia21@csu.edu.cn.

Funding

National Key Research and Development Program of China 2024YFA1108704National Natural Science Foundation of China No. 82371105Natural Science Foundation of Hunan Province 2022JJ30959Natural Science Foundation of Hunan Province 2022JJ30964Natural Science Foundation of Hunan Province 2024JJ6699
6 · The paper itself

Abstract

Thyroid-associated ophthalmopathy (TAO) is an autoimmune disorder affecting the orbit, potentially resulting in blindness. This study focused on the role of hypoxia in its pathogenesis through integrative bioinformatics and experimental validation. Five differentially expressed genes associated with hypoxia (HRDEGs) were identified via Gene Expression Omnibus (GEO) database mining: AGO2, CP, DIO3, PSMD14, WTIP. qPCR and immunohistochemistry confirmed reduced expressions of AGO2 and PSMD14, and elevated expression of DIO3 in TAO orbital tissues. Hypoxia exposure aggravated the above dysregulation and promoted proliferation and adipogenesis of orbital fibroblasts. A predictive model was developed using four machine learning algorithms and validated for its effectiveness in diagnosing TAO and assessing disease severity. Functional enrichment revealed hypoxia response, apoptosis, and programmed cell death. Protein-protein interaction and mRNA interaction networks of HRDEGs were established, predicting transcription factors, microRNAs, RNA-binding proteins, and drugs interacting with them. Immune infiltration analysis demonstrated the accumulation of Type 17 T helper cells and CD56 dim natural killer cells in high-risk patients, correlating with DIO3 upregulation and AGO2 downregulation. Flow cytometry confirmed the enrichment of these two cell types in the orbital tissue of TAO. This study revealed hypoxia-immunity crosstalk in TAO pathogenesis, providing a validated predictive model and molecular targets for precision interventions.

Indexed as

Graves OphthalmopathyHypoxiaMachine LearningComputational BiologyFibroblastsGene Expression RegulationGene Regulatory NetworksHumansProtein Interaction MapsHypoxiaImmune microenvironmentPredictive modelThyroid-associated ophthalmopathy

Identifiers

PMID40596187
PMCPMC12214582

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.