Evidence map›Paper›PMID 40601888›Full record

ArticleJournal of clinical oncology : official journal of the American Society of Clinical Oncology2025

Tumor-Intrinsic and Microenvironmental Determinants of Impaired Antitumor Immunity in Chromophobe Renal Cell Carcinoma.

Chris Labaki, Eddy Saad, Katrine N Madsen, Charbel Hobeika, Kevin Bi, Michel Alchoueiry, Sabrina Camp, Yue Hou, Ziad Bakouny, Sayed Matar and 38 more

Abstract read
In one paragraph

Article in Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors.

Chris LabakiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Eddy SaadDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0001-8700-9312
Katrine N MadsenCenter of Molecular and Cellular Oncology (CMCO), Yale School of Medicine, New Haven, CT.ORCID 0000-0002-2934-1429
Charbel HobeikaDepartment of Medicine, Cleveland Clinic Fairview Hospital, Cleveland, OH.ORCID 0009-0009-3157-027X
Kevin BiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Michel AlchoueiryPulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA.ORCID 0000-0001-8288-7212
Sabrina CampDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-9695-5527
Yue HouAkoya Biosciences Inc, Marlborough, MA.ORCID 0000-0002-4377-4204
Ziad BakounyDepartment of Medical Oncology, Memorial Sloan Kettering Cancer Center, New York, NY.ORCID 0000-0003-1906-5704
Sayed MatarDepartment of Pathology, Brigham and Women's Hospital, Boston, MA.ORCID 0000-0002-9687-2318
Nourhan El AhmarDepartment of Pathology, Brigham and Women's Hospital, Boston, MA.
Jackson NymanPathAI, Inc, Boston, MA.
Long ZhangUniversity of Shanghai for Science and Technology, Shanghai, China.
Carmen PrioloPulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA.ORCID 0000-0001-5716-3642
Rishabh RoutCenter of Molecular and Cellular Oncology (CMCO), Yale School of Medicine, New Haven, CT.ORCID 0009-0003-9921-9773
Melissa DaouDepartment of Medicine, Yale University, New Haven, CT.
Damir KhabibullinPulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA.ORCID 0000-0003-0776-7186
Samer SalemPulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA.ORCID 0000-0002-4223-6025
Nicholas SchindlerCenter of Molecular and Cellular Oncology (CMCO), Yale School of Medicine, New Haven, CT.ORCID 0000-0003-2277-7729
Renée Maria SalibyCenter of Molecular and Cellular Oncology (CMCO), Yale School of Medicine, New Haven, CT.ORCID 0000-0002-9241-597X
Kevin MeliRBC Capital Markets, New York, NY.ORCID 0000-0002-9579-3829
J Connor WellsBC Cancer Agency, Vancouver, Canada.ORCID 0000-0001-7655-1405
Erica PimentaDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Kosuke TakemuraTom Baker Cancer Centre, University of Calgary, Calgary, AB, Canada.ORCID 0000-0003-4321-6074
Jihye ParkDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-4451-2046
Marc EidDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-4738-5695
Karl SemaanDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Jingxin FuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-4028-3661
Thomas DenizeDepartment of Pathology, Massachusetts General Hospital, Boston, MA.ORCID 0000-0002-8618-7691
Razane El Hajj ChehadeDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Marc MachaalaniDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-6708-9922
Rashad NawfalDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0001-5428-5660
Wassim Daoud KhatounDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0001-6515-5722
Mustafa SalehDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0003-2757-113X
Jad El MasriDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Nina Rossa HaddadJohns Hopkins University School of Medicine, Baltimore, MD.ORCID 0009-0000-1132-6637
Wenxin XuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-8450-2037
Bradley A McGregorDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-8298-0289
Michelle S HirschDepartment of Pathology, Brigham and Women's Hospital, Boston, MA.
Wanling XieDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0001-5995-8000
Daniel Y C HengTom Baker Cancer Centre, University of Calgary, Calgary, AB, Canada.
David F McDermottDepartment of Medical Oncology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA.ORCID 0000-0002-2675-5095
Sabina SignorettiDepartment of Pathology, Brigham and Women's Hospital, Boston, MA.ORCID 0000-0002-5000-9105
Eliezer M Van AllenDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-0201-4444
Sachet A ShuklaDepartment of Hematopoietic Biology and Malignancy, The University of Texas MD Anderson Cancer Center, Texas, Houston, TX.
Toni K ChoueiriDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-9201-3217
Elizabeth P HenskePulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA.ORCID 0000-0001-7978-6699
David A BraunCenter of Molecular and Cellular Oncology (CMCO), Yale School of Medicine, New Haven, CT.ORCID 0000-0003-4543-5553

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Tumor and immune determinants of effective anti-tumor immunity in renal cell carcinomaR37CA279822 · NCI · YALE UNIVERSITY · PI David Braun · 2023 to 2026
$2.6M
NCI NIH HHS P30 CA008748NCI NIH HHS R37 CA279822
6 · The paper itself

Abstract

purposeWhile immune checkpoint inhibition (ICI) has transformed the management of many advanced renal cell carcinomas (RCCs), the determinants of effective antitumor immunity for chromophobe RCC (ChRCC) and renal oncocytic tumors remain an unmet clinical and scientific need.

methodsSingle-cell transcriptomic and T-cell receptor profiling was performed on tumor and adjacent normal tissue of patients with ChRCC and renal oncocytic neoplasms. Using machine learning, the cellular origin of renal oncocytic neoplasms was evaluated, with analysis of associated oncogenic pathways. Using immunohistochemistry, immune infiltration was analyzed in renal oncocytic neoplasms in comparison with clear cell RCC (ccRCC). Immune checkpoint expression, clonal expansion, and tumor specificity were compared between ChRCC and ccRCC. Using the International Metastatic RCC Database Consortium data set, clinical outcomes of patients with metastatic ChRCC (mChRCC) treated with first-line systemic regimens were compared with those of patients with ccRCC.

resultsWe validated α-intercalated cells as the cellular origin of renal oncocytic neoplasms. We identified a downregulation of HLA class I molecules with enrichment of potentially targetable pathways including mammalian target of rapamycin and ferroptosis in ChRCC. The tumor microenvironment of ChRCC showed markedly decreased immune infiltration, with a pronounced depletion in tumor-infiltrating CD8

conclusionImmunogenomic analysis of ChRCC revealed profound depletion of T cells, with an immune phenotype marked by a lack of expression of immune checkpoints and poor tumor specificity, suggesting that the few T cells in these tumor types are likely nonspecific bystanders. This immune-cold environment hinders an effective response to immunotherapy and underscores the need for ChRCC-tailored treatments designed to improve tumor-specific T-cell infiltration into the microenvironment.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsTumor MicroenvironmentFemaleHumansImmune Checkpoint InhibitorsLymphocytes, Tumor-InfiltratingMaleMiddle AgedImmune Checkpoint Inhibitors

Identifiers

PMID40601888
PMCPMC13060539

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.