Evidence map›Paper›PMID 40611658›Full record

ArticleCancer medicine2025

Adaptive 3D Self-Assembly of Colorectal Cancer Cells With Unchanged Tumor Phenotype and Drug Sensitivity.

Yong Zhang, Yang Liu, Yang Yang, Yiwei Li, Lei Liu, Yang Huang, Weiting Zhao, Yong Liu, Minghao Zhang, Yunshan Zhao and 1 more

Abstract read
In one paragraph

Article in Cancer medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yong ZhangSenior Department of General Surgery, the First Medical Center of Chinese PLA General Hospital, Beijing, China.
Yang LiuSenior Department of Hepato-Pancreato-Biliary Surgery, the First Medical Center of PLA General Hospital, Beijing, China.
Yang YangDarkjade Sciences, Inc., Beijing, China.
Yiwei LiDarkjade Sciences, Inc., Beijing, China.
Lei LiuDarkjade Sciences, Inc., Beijing, China.
Yang HuangDarkjade Sciences, Inc., Beijing, China.
Weiting ZhaoDarkjade Sciences, Inc., Beijing, China.
Yong LiuBeijing Fengtai Hospital of Integrated Traditional Chinese and Western Medicine, Beijing, China.
Minghao ZhangDarkjade Sciences, Inc., Beijing, China.
Yunshan ZhaoDarkjade Sciences, Inc., Beijing, China.ORCID https://orcid.org/0009-0005-7743-5250
Chenggang LiSenior Department of General Surgery, the First Medical Center of Chinese PLA General Hospital, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThree-dimensional (3D) self-assembly of organoids or tumoroids based on 3D rebuilding environment (3DRE) aims to preserve the biological characteristics of original tumors, but whether the self-assembly process is influenced by 3DREs remains unknown. We here compared the colorectal cancer (CRC) tumoroids cultured using different 3DREs, including dome culture (DG), ultra-low adherence culture without Matrigel(UA) or with Matrigel (UAG), and hanging-drop without Matrigel (HD) and with Matrigel (HDG).

methodsCRC cells were cultured to form tumoroids using DG, UA, UAG, HD, and HDG, respectively. The differences between these tumoroids were examined using light observation, histological staining, RNA sequencing, and drug sensitivity testing.

resultsThe CRC cells aggregated with each other and formed larger, converged tumoroids in the UA and the HD compared to the Matrigel. Histochemical examination revealed that the tumoroids maintained the CRC-specific characteristics of forming lumens and biomarkers, but the number of lumens decreased, and the cell arrangement was in disorder with increasing impetus of 3DREs that promote cell aggregation ranging from DM, UA to HD. RNA sequencing revealed that the tumoroids retained a similar gene expression pattern, but the oncogenes related to metastasis and poor prognosis were upregulated, and development and morphogenesis-related genes were downregulated when cultured in the UA and HD compared to the Matrigel. However, the drug sensitivity test showed that the tumoroids, regardless of the methods they were derived, maintained similar sensitivity to drugs.

conclusionsWe demonstrated that CRC tumoroids developed towards disordered self-assembly in adaptation to the environment without a matrix, but this adaptation did not alter tumor-specific phenotypes and drug sensitivity.

Indexed as

Antineoplastic AgentsCell Culture Techniques, Three DimensionalColorectal NeoplasmsOrganoidsCell Line, TumorCollagenDrug CombinationsDrug Resistance, NeoplasmGene Expression Regulation, NeoplasticHumansLamininPhenotypeProteoglycansAntineoplastic AgentsCollagenDrug CombinationsLamininmatrigelProteoglycansadaptive remodelingdrug sensitivityself‐assembly

Identifiers

PMID40611658
PMCPMC12231192

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.