Evidence map›Paper›PMID 40613196›Full record

ArticleMolecular medicine reports2025

Combination of machine learning and protein‑protein interaction network established one ATM‑DPP4‑TXN ferroptotic diagnostic model with experimental validation.

Mengze Wu, Zhao Zou, Yuce Peng, Suxin Luo

Abstract read
In one paragraph

Article in Molecular medicine reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mengze Wu *Division of Cardiology, The First Affiliated Hospital of Chongqing Medical University, Yuzhong, Chongqing 400016, P.R. China.
Zhao Zou *Division of Cardiology, The First Affiliated Hospital of Chongqing Medical University, Yuzhong, Chongqing 400016, P.R. China.
Yuce PengDivision of Cardiology, The First Affiliated Hospital of Chongqing Medical University, Yuzhong, Chongqing 400016, P.R. China.
Suxin LuoDivision of Cardiology, The First Affiliated Hospital of Chongqing Medical University, Yuzhong, Chongqing 400016, P.R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ferroptosis and lethal sepsis are interlinked, although this association remains largely unknown to clinical panels. Sepsis is characterized by dysfunction of the inflammatory microenvironment. Most septic biomarkers lack independent validation, and a comprehensive diagnosis comprising biomarker assessment combined with clinical evaluation may improve sepsis management. Targeting ferroptosis regulators may offer new hope for uncovering the inflammatory machinery and for developing novel diagnostic methods for sepsis, and bioinformatics analyses are a valuable tool to investigate this further. In the present study, septic datasets were obtained from the Gene Expression Omnibus database. Differentially expressed genes (DEGs) were subsequently introduced in enrichment analyses and intersected with ferroptotic genes for acquiring ferroptosis‑related DEGs (FRDEGs). A protein‑protein interaction network (PPIN) was then constructed to retain hub‑FRDEGs, and this was imported into three machine learning algorithms. A nomogram based on the logistic regression model was subsequently built and validated

Indexed as

Ataxia Telangiectasia Mutated ProteinsFerroptosisMachine LearningProtein Interaction MapsSepsisThioredoxinsBiomarkersComputational BiologyDatabases, GeneticDipeptidyl Peptidase 4Gene Expression ProfilingGene Regulatory NetworksHumansAtaxia Telangiectasia Mutated ProteinsATM protein, humanBiomarkersDipeptidyl Peptidase 4DPP4 protein, humanThioredoxinsataxia telangiectasia mutatedDPP4ferroptosisimmune microenvironmentsepsisthioredoxin

Identifiers

PMID40613196
PMCPMC12242371

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.