Evidence map›Paper›PMID 40616587›Full record

ArticleCell biology international2025

Beyond Histones: Unveiling the Functional Roles of Protein Acetylation in Prokaryotes and Eukaryotes.

Bruno Sousa Bonifácio, Ariely Barbosa Leite, Ana Caroline de Castro Nascimento Sousa, Suellen Rodrigues Maran, Antoniel Augusto Severo Gomes, Elton J R Vasconcelos, Nilmar Silvio Moretti

Abstract read
In one paragraph

Article in Cell biology international, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bruno Sousa BonifácioLaboratório de Biologia Molecular de Patógenos-Departamento de Microbiologia, Imunologia e Parasitologia-Escola Paulista de Medicina-Universidade Federal de São Paulo-Unifesp, São Paulo, Brasil.ORCID https://orcid.org/0000-0002-8501-4254
Ariely Barbosa LeiteLaboratório de Biologia Molecular de Patógenos-Departamento de Microbiologia, Imunologia e Parasitologia-Escola Paulista de Medicina-Universidade Federal de São Paulo-Unifesp, São Paulo, Brasil.ORCID https://orcid.org/0000-0001-6991-3543
Ana Caroline de Castro Nascimento SousaLaboratório de Biologia Molecular de Patógenos-Departamento de Microbiologia, Imunologia e Parasitologia-Escola Paulista de Medicina-Universidade Federal de São Paulo-Unifesp, São Paulo, Brasil.
Suellen Rodrigues MaranLaboratório de Biologia Molecular de Patógenos-Departamento de Microbiologia, Imunologia e Parasitologia-Escola Paulista de Medicina-Universidade Federal de São Paulo-Unifesp, São Paulo, Brasil.
Antoniel Augusto Severo GomesDepartamento de Biofísica e Farmacologia, Instituto de Biociências-Universidade Estadual Paulista (UNESP), Botucatu, São Paulo, Brasil.
Elton J R VasconcelosLeeds Omics, University of Leeds, Leeds, UK.ORCID https://orcid.org/0000-0001-5130-6622
Nilmar Silvio MorettiLaboratório de Biologia Molecular de Patógenos-Departamento de Microbiologia, Imunologia e Parasitologia-Escola Paulista de Medicina-Universidade Federal de São Paulo-Unifesp, São Paulo, Brasil.ORCID https://orcid.org/0000-0003-0455-2497

Funding

This study was supported by Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (88887.463976/2019-00), Fundação de Amparo à Pesquisa do Estado de São Paulo (2018/09948-0, 2021/13477-6, 2022/03075-0, 2023/16672-0), and Conselho Nacional de Desenvolvimento Científico e Tecnológico (314103/2021-0).
6 · The paper itself

Abstract

Lysine acetylation plays a crucial role in cellular processes and is found across various evolutionary organisms. Recent advancements in proteomic techniques revealed the presence of acetylation in thousands of non-histone proteins. Here, we conducted extensive meta-analysis of 48 acetylomes spanning diverse organisms, including archaea, bacteria, fungi, protozoa, worms, plants, insects, crustacea, fish, and mammals. Our analyzes revealed a predominance of a single acetylation site in a protein detected in all studied organisms, and proteins heavily acetylated, with > 5-10 acetylated-sites, were represented by Hsp70, histone, or transcription GTP-biding domain. Moreover, using gene enrichment approaches we found that ATP metabolic processes, glycolysis, aminoacyl-tRNA synthetase pathways and oxidative stress response are among the most acetylated cellular processes. Finally, to better explore the regulatory function of acetylation in glycolysis and oxidative stress we used aldolase and superoxide dismutase A (SODA) enzymes as model. For aldolase, we found that K147 acetylation, responsible to regulate human enzyme, conserved in all phylogenic clade, suggesting that this acetylation might play the same role in other species; while for SODA, we identified many lysine residues in different species present in the tunnel region, which was demonstrated for human and Trypanosoma cruzi, as negative regulator, also suggesting a conserved regulatory mechanism. In conclusion, this study provides insights into the conservation and functional significance of lysine acetylation in different organisms emphasizing its roles in cellular processes, metabolic pathways, and molecular regulation, shedding light in the extensive function of non-histone lysine acetylation.

Indexed as

EukaryotaHistonesProkaryotic CellsAcetylationAnimalsGlycolysisHumansLysineOxidative StressProtein Processing, Post-TranslationalProteomicsHistonesLysineacetylationacetylomealdolaseglycolysissuperoxide dismutase

Identifiers

PMID40616587
PMCPMC12445822

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.