Evidence map›Paper›PMID 40629653›Full record

ArticleMedicine2025

Construction of a risk model based on m5C-associated lncRNAs to predict the prognosis in renal cell carcinoma.

Baosai Lu, Jin Wu, Yalin Niu, Yuewei Yin, Chenming Zhao

Abstract read
In one paragraph

Article in Medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Baosai LuDepartment of Urology, The Second Hospital of Hebei Medical University, Shijiazhuang, China.
Jin Wu
Yalin Niu
Yuewei Yin
Chenming Zhao

Funding

Hebei Province Foundation for Returned Scholars C20230354
6 · The paper itself

Abstract

Renal cell carcinoma (RCC) is one of the most common tumors of the urinary system, and its outcomes vary widely among individuals, primarily due to different molecular characteristics. Both 5-methylcytosine (m5C) methylation and long noncoding RNAs (lncRNAs) play crucial roles in the epigenetics of RCC and may serve as biomarkers for predicting prognosis. Clinical information and transcriptome data of patients with RCC were extracted from the The Cancer Genome Atlas database. Using least absolute shrinkage and selection operator analysis and multivariate Cox regression, m5C-related lncRNAs were filtered. We then built a prognostic prediction model based on m5C-related lncRNAs. The model was analyzed for its predictive role in overall survival (OS) and response to targeted and immunotherapeutic treatments. We selected 3 lncRNAs, HM13-IT1, COLCA1, and AC010285.3, to construct a predictive model that categorizes patients into high-risk and low-risk groups. The results indicated that the high-risk group exhibited a significantly poorer OS than the low-risk group, and upon validation, it was identified as an independent risk factor. Through gene ontology enrichment analysis, this model was found to be closely associated with tumor immune function. The high-risk group showed higher tumor mutation burden and tumor immune dysfunction and exclusion scores, suggesting poorer response to immunotherapy. Additionally, the high-risk group exhibited reduced responsiveness to sorafenib. The predictive model for RCC can accurately forecast the prognosis of RCC, offering new tools for personalized diagnosis and treatment of individual patients.

Indexed as

5-MethylcytosineCarcinoma, Renal CellKidney NeoplasmsRNA, Long NoncodingBiomarkers, TumorFemaleHumansMaleMiddle AgedPrognosisRisk AssessmentRisk Factors5-MethylcytosineBiomarkers, TumorRNA, Long Noncoding5-methylcytosinebiomarkerlong-noncoding RNAsprognosisrenal cell carcinoma

Identifiers

PMID40629653
PMCPMC12237355

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.