Evidence map›Paper›PMID 40632085›Full record

ArticleBlood cancer discovery2025

An Isoform-Specific RUNX1C-BTG2 Axis Governs AML Quiescence and Chemoresistance.

Cuijuan Han, Zhiping Zhang, Edie I Crosse, Sogand Sajedi, Bin Lu, Xiyue Wang, Sadik Karma, Mitch Kostich, Sakthi Harini Rajendran, Dylan B Udy and 11 more

Abstract read
In one paragraph

Article in Blood cancer discovery, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Cuijuan HanThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0000-0002-7165-7785
Zhiping ZhangDepartment of Genetics and Genome Sciences, UConn Health, Farmington, Connecticut.ORCID 0000-0002-0116-9719
Edie I CrossePublic Health Sciences and Basic Sciences Divisions, Fred Hutchinson Cancer Research Center, Seattle, Washington.ORCID 0000-0002-0477-7365
Sogand SajediDepartment of Leukemia, The University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0009-0008-4157-5579
Bin LuSanford Burnham Prebys Medical Discovery Institute, San Diego, California.ORCID 0000-0001-6675-0785
Xiyue WangThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0009-0001-5084-3730
Sadik KarmaThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0000-0001-6401-9948
Mitch KostichThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0000-0003-1524-7789
Sakthi Harini RajendranThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0000-0002-3319-7140
Dylan B UdyPublic Health Sciences and Basic Sciences Divisions, Fred Hutchinson Cancer Research Center, Seattle, Washington.ORCID 0000-0003-4440-0762
Steven ChenDepartment of Genetics and Genome Sciences, UConn Health, Farmington, Connecticut.ORCID 0009-0002-2336-335X
Alexander ArnukThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0000-0002-7134-6282
Abimbola Eunice LawalThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0009-0001-1696-968X
Kayla R KoenigThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0009-0009-2077-0225
Meryl McKennaThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0009-0006-0230-9046
Patrick K RevilleDepartment of Leukemia, The University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0001-8433-3360
Hussein A AbbasDepartment of Leukemia, The University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0003-2946-3562
Omar Abdel-WahabMolecular Pharmacology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0002-3907-6171
Pedro MiuraDepartment of Genetics and Genome Sciences, UConn Health, Farmington, Connecticut.ORCID 0000-0002-8434-5027
Robert K BradleyPublic Health Sciences and Basic Sciences Divisions, Fred Hutchinson Cancer Research Center, Seattle, Washington.ORCID 0000-0002-8046-1063
Eric WangThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut.ORCID 0000-0001-7865-6702

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Paul Robson · 1985 to 2026
$61.9M
The Memorial Sloan Kettering Cancer Center SPORE in LeukemiaP50CA254838 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Eytan Stein · 2021 to 2026
$16.8M
Genetic and molecular basis for SRSF2 mutations in myelodysplasiaR01HL128239 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Omar Abdel-Wahab, Robert K Bradley · 2015 to 2026
$8.0M
Interrogating the minor spliceosome to understand and treat leukemiaR01CA251138 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ABDEL-WAHAB, OMAR, BRADLEY, ROBERT K · 2020 to 2024
$3.3M
Scope and mechanism of coordinated alternative splicing and alternative polyadenylationR35GM138319 · NIGMS · UNIVERSITY OF NEVADA RENO · PI Pedro Miura · 2020 to 2026
$3.0M
Synthetic introns for selective targeting of RNA splicing factor-mutant leukemiaR01CA283364 · NCI · FRED HUTCHINSON CANCER CENTER · PI Omar Abdel-Wahab, Robert K Bradley · 2023 to 2026
$2.9M
Targeting an RNA Binding Protein Network in Acute Myeloid LeukemiaR01CA242020 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ABDEL-WAHAB, OMAR, AIFANTIS, IANNIS · 2020 to 2024
$2.7M
Summer Undergraduate Research Fellowship in the Molecular Biology and Genomics of Human CancerR25CA233420 · NCI · JACKSON LABORATORY · PI Jeffrey Hsu-Min Chuang, Sarah Wojiski · 2019 to 2026
$866k
Butler Family FoundationFoundation for the National Institutes of Health (FNIH) CA242020Foundation for the National Institutes of Health (FNIH) CA251138Foundation for the National Institutes of Health (FNIH) CA254838-01Foundation for the National Institutes of Health (FNIH) CA283364Foundation for the National Institutes of Health (FNIH) HL128239Foundation for the National Institutes of Health (FNIH) P30CA034196Leukemia Research Foundation (LRF)National Institute of General Medical Sciences (NIGMS) R35GM138319NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA034196NCI NIH HHS P50 CA254838NCI NIH HHS R01 CA242020NCI NIH HHS R01 CA251138NCI NIH HHS R01 CA283364NCI NIH HHS R25 CA233420NHLBI NIH HHS R01 HL128239NIGMS NIH HHS R35 GM138319
6 · The paper itself

Abstract

Aberrant levels or structures of RNA isoforms are a hallmark of many cancers, including acute myeloid leukemia (AML), yet their role in AML chemoresistance remains unclear. We conducted a paired analysis of RNA isoform changes in patients with AML before therapy and at relapse after chemotherapy and identified intragenic DNA methylation at the proximal promoter of the transcription factor RUNX1, which resulted in elevated expression of the long-isoform RUNX1C through its alternative distal promoter. The unique N-terminal region of RUNX1C orchestrated an isoform-specific transcriptional program that promoted chemoresistance, with its direct target BTG2 playing a role in chemotherapy resistance. BTG2 promoted rRNA deadenylation, resulting in decreased mRNA expression and stability. Deletion of rRNAs increased cellular quiescence. Moreover, RNA-based targeting of RUNX1C reactivated quiescent leukemia cells and enhanced chemotherapy efficacy. These findings delineated an isoform-specific transcriptional circuit that governed chemotherapy response, providing a potential therapeutic strategy to mitigate AML recurrence. SIGNIFICANCE: This study identifies RUNX1C as a contributor to AML chemoresistance and an inducer of quiescence through BTG2. Targeting RUNX1C with RNA-based approaches disrupts this state and improves chemotherapy response, highlighting RUNX1C inhibition as a promising strategy to overcome resistance and enhance treatment efficacy in AML.

Indexed as

Core Binding Factor Alpha 2 SubunitDrug Resistance, NeoplasmImmediate-Early ProteinsLeukemia, Myeloid, AcuteTumor Suppressor ProteinsCell Line, TumorGene Expression Regulation, LeukemicHumansProtein IsoformsBTG2 protein, humanCore Binding Factor Alpha 2 SubunitImmediate-Early ProteinsProtein IsoformsTumor Suppressor Proteins

Identifiers

PMID40632085
PMCPMC12405853

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.