Evidence mapPaperPMID 40641097Full record

ArticlePhysiological reports2025

Association of ATP-binding cassette transporter genomic alterations and expressions with patient survival in breast and prostate cancer.

Abdulaziz H Alanazi, Nidhi Shenoy, Payaningal R Somanath

Abstract read
In one paragraph

Article in Physiological reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Abdulaziz H AlanaziClinical and Experimental Therapeutics, College of Pharmacy, University of Georgia, Augusta, Georgia, USA.
Nidhi ShenoyClinical and Experimental Therapeutics, College of Pharmacy, University of Georgia, Augusta, Georgia, USA.
Payaningal R SomanathClinical and Experimental Therapeutics, College of Pharmacy, University of Georgia, Augusta, Georgia, USA.ORCID https://orcid.org/0000-0003-3017-0230

Funding

Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
HHS | NIH | National Center for Advancing Translational Sciences (NCATS) UL1TR002378
6 · The paper itself

Abstract

ATP-Binding Cassette (ABC) transporters play a key role in drug resistance and cancer progression. We analyzed the correlation between ABC transporter gene alterations and patient survival in breast and prostate cancers using large-scale genomic datasets. DepMap analysis revealed the overall dependency of cancer cell lines on ABC transporter genes such as ABCG2, ABCG1, ABCC4, ABCA2, ABCA3, ABCC2, ABCC3, ABCC6, ABCC7 (CFTR), and ABCC9, with ABCC6 and ABCC7 showing notably high dependence. Data from the cBioPortal for Cancer Genomics, incorporating multiple phase-3 randomized clinical trials, identified genomic alterations including amplifications, deletions, and mutations in breast cancer patients (32 studies, 15,404 samples) and prostate cancer patients (29 studies, 13,857 samples). Kaplan-Meier analysis showed a significant correlation between ABC transporter gene alterations and overall survival in prostate cancer, but not in breast cancer. However, we found reduced relapse-free survival correlating with reduced RNA expression in select ABC transporters in 4929 breast cancer patients in a KMplot analysis. These findings highlight the potential role of ABC transporters in prostate and breast cancer prognosis and warrant further investigation into their therapeutic implications.

Indexed as

ATP-Binding Cassette TransportersBreast NeoplasmsProstatic NeoplasmsCell Line, TumorFemaleGene Expression Regulation, NeoplasticHumansMaleMutationATP-Binding Cassette TransportersABC transporterscancerdrug resistancegenetic alterationspatient survival

Identifiers

PMID40641097
PMCPMC12245978

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.