Evidence map›Paper›PMID 40644691›Full record

ArticleJournal of medical Internet research2025

Standardizing Survey Data Collection to Enhance Reproducibility: Development and Comparative Evaluation of the ReproSchema Ecosystem.

Yibei Chen, Dorota Jarecka, Sanu Ann Abraham, Remi Gau, Evan Ng, Daniel M Low, Isaac Bevers, Alistair Johnson, Anisha Keshavan, Arno Klein and 9 more

Abstract readComparative Study
In one paragraph

Article in Journal of medical Internet research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Building an open infrastructure for molecular neuroimaging: Standards and tools from the OpenNeuroPET initiative.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Yibei ChenMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States.ORCID 0000-0003-2882-0900
Dorota JareckaMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States.ORCID 0000-0001-8282-2988
Sanu Ann AbrahamFlexxbotics Inc, Boston, MA, United States.ORCID 0000-0002-6169-8575
Remi GauNeuro Data Science ORIGAMI Laboratory, McConnell Brain Imaging Centre, Faculty of Medicine, McGill University, Montréal, QC, Canada.ORCID 0000-0002-1535-9767
Evan NgThe Hospital for Sick Children, Toronto, ON, Canada.ORCID 0009-0006-8554-5414
Daniel M LowMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States.ORCID 0000-0002-8866-8667
Isaac BeversMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States.ORCID 0009-0002-0074-0087
Alistair JohnsonMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States.ORCID 0000-0002-8735-3014
Anisha KeshavanBigHat Biosciences, San Mateo, CA, United States.ORCID 0000-0003-3554-043X
Arno KleinChild Mind Institute, New York, NY, United States.ORCID 0000-0002-0707-2889
Jon ClucasChild Mind Institute, New York, NY, United States.ORCID 0000-0001-7590-5806
Zaliqa RosliMcGill Centre for Integrative Neuroscience, Montréal Neurological Institute-Hospital, Montréal, QC, Canada.ORCID 0009-0004-6099-4868
Steven M HodgeDepartment of Psychiatry, University of Massachusetts Chan Medical School, Worcester, MA, United States.ORCID 0000-0002-6035-4586
Janosch LinkersdörferCenter for Human Development, University of California, San Diego, San Diego, CA, United States.ORCID 0000-0002-1577-1233
Hauke BartschDepartment of Informatics, University of Bergen, Bergen, Norway.ORCID 0000-0003-1486-4128
Samir DasMcConnell Brain Imaging Center, McGill Centre for Integrative Neuroscience, Montréal Neurological Institute, McGill University, Montréal, QC, Canada.ORCID 0000-0003-2018-8760
Damien FairInstitute of Child Development, University of Minnesota, Minneapolis, MN, United States.ORCID 0000-0001-8602-393X
David KennedyDepartment of Psychiatry, University of Massachusetts Chan Medical School, Worcester, MA, United States.ORCID 0000-0002-9377-0797
Satrajit S GhoshMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States.ORCID 0000-0002-5312-6729

Funding

Bridge2AI: Voice as a Biomarker of Health - Building an ethically sourced, bioaccoustic database to understand disease like never beforeOT2OD032720 · OD · UNIVERSITY OF SOUTH FLORIDA · PI BENSOUSSAN, YAEL EMILIE, BÉLISLE-PIPON, JEAN-CHRISTOPHE · 2022 to 2025
$18.0M
Resource DiscoveryP41EB019936 · NIBIB · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MARYANN E MARTONE · 2016 to 2026
$15.2M
NIBIB NIH HHS P41 EB019936NIH HHS OT2 OD032720
6 · The paper itself

Abstract

backgroundInconsistencies in survey-based (eg, questionnaire) data collection across biomedical, clinical, behavioral, and social sciences pose challenges to research reproducibility. ReproSchema is an ecosystem that standardizes survey design and facilitates reproducible data collection through a schema-centric framework, a library of reusable assessments, and computational tools for validation and conversion. Unlike conventional survey platforms that primarily offer graphical user interface-based survey creation, ReproSchema provides a structured, modular approach for defining and managing survey components, enabling interoperability and adaptability across diverse research settings.

objectiveThis study examines ReproSchema's role in enhancing research reproducibility and reliability. We introduce its conceptual and practical foundations, compare it against 12 platforms to assess its effectiveness in addressing inconsistencies in data collection, and demonstrate its application through 3 use cases: standardizing required mental health survey common data elements, tracking changes in longitudinal data collection, and creating interactive checklists for neuroimaging research.

methodsWe describe ReproSchema's core components, including its schema-based design; reusable assessment library with >90 assessments; and tools to validate data, convert survey formats (eg, REDCap [Research Electronic Data Capture] and Fast Healthcare Interoperability Resources), and build protocols. We compared 12 platforms-Center for Expanded Data Annotation and Retrieval, formr, KoboToolbox, Longitudinal Online Research and Imaging System, MindLogger, OpenClinica, Pavlovia, PsyToolkit, Qualtrics, REDCap, SurveyCTO, and SurveyMonkey-against 14 findability, accessibility, interoperability, and reusability (FAIR) principles and assessed their support of 8 survey functionalities (eg, multilingual support and automated scoring). Finally, we applied ReproSchema to 3 use cases-NIMH-Minimal, the Adolescent Brain Cognitive Development and HEALthy Brain and Child Development Studies, and the Committee on Best Practices in Data Analysis and Sharing Checklist-to illustrate ReproSchema's versatility.

resultsReproSchema provides a structured framework for standardizing survey-based data collection while ensuring compatibility with existing survey tools. Our comparison results showed that ReproSchema met 14 of 14 FAIR criteria and supported 6 of 8 key survey functionalities: provision of standardized assessments, multilingual support, multimedia integration, data validation, advanced branching logic, and automated scoring. Three use cases illustrating ReproSchema's flexibility include standardizing essential mental health assessments (NIMH-Minimal), systematically tracking changes in longitudinal studies (Adolescent Brain Cognitive Development and HEALthy Brain and Child Development), and converting a 71-page neuroimaging best practices guide into an interactive checklist (Committee on Best Practices in Data Analysis and Sharing).

conclusionsReproSchema enhances reproducibility by structuring survey-based data collection through a structured, schema-driven approach. It integrates version control, manages metadata, and ensures interoperability, maintaining consistency across studies and compatibility with common survey tools. Planned developments, including ontology mappings and semantic search, will broaden its use, supporting transparent, scalable, and reproducible research across disciplines.

Indexed as

Data CollectionHumansReproducibility of ResultsSoftwareSurveys and Questionnairesdata collectionFAIRfindability, accessibility, interoperability, and reusabilityreproducibilityschemasurvey

Identifiers

PMID40644691
PMCPMC12299943

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.