Evidence map›Paper›PMID 40650591›Full record

ArticleThe journal of physical chemistry. B2025

Binding of Soluble Ligands to Membrane Receptors: A Molecular Dynamics Simulation Study.

Ruihan Hou, Jie Gao, Jingchun Chen, Rong Wang, Bartosz Różycki, Jinglei Hu

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ruihan HouKuang Yaming Honors School, Nanjing University, Nanjing 210023, China.
Jie GaoKuang Yaming Honors School, Nanjing University, Nanjing 210023, China.
Jingchun ChenKuang Yaming Honors School, Nanjing University, Nanjing 210023, China.
Rong WangDepartment of Polymer Science and Engineering, Key Laboratory of High Performance Polymer Material and Technology of Ministry of Education, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China.ORCID 0000-0001-7525-1400
Bartosz RóżyckiInstitute of Physics, Polish Academy of Sciences, Aleja Lotników 32/46, Warsaw 02-668, Poland.ORCID 0000-0001-5938-7308
Jinglei HuKuang Yaming Honors School, Nanjing University, Nanjing 210023, China.ORCID 0000-0002-5758-2879

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The binding of membrane receptors to their ligands anchored in an apposing membrane mediates such biological processes as cell adhesion and signaling, and is known to be determined not only by direct receptor-ligand interactions but also by such factors as flexibility and thermal fluctuations of the apposing membranes. The binding of soluble ligands to membrane receptors initiates various cellular processes; however, to the best of our knowledge, its dependence on membrane properties has not been studied. Here, we employed molecular dynamics simulations to fill in this knowledge gap. Our simulations demonstrate that, in the absence of specific lipid-protein interactions and clustering of membrane receptors, the equilibrium and kinetic rate constants for the binding of soluble ligands to membrane receptors are determined almost entirely by direct receptor-ligand interactions and are practically unaffected by the curvature, flexibility and thermal fluctuations of the membrane.

Indexed as

Molecular Dynamics SimulationReceptors, Cell SurfaceKineticsLigandsLipid BilayersProtein BindingLigandsLipid BilayersReceptors, Cell Surface

Identifiers

PMID40650591
PMCPMC12302211

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.