Evidence map›Paper›PMID 40657955›Full record

ArticleBiology of the cell2025

Dynamic Organization of Cells in Colonic Epithelium is Encoded by Five Biological Rules.

Bruce M Boman, Thien-Nam Dinh, Keith Decker, Brooks Emerick, Shirin R Modarai, Lynn M Opdenaker, Jeremy Z Fields, Christopher Raymond, Gilberto Schleiniger

Abstract read
In one paragraph

Article in Biology of the cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Bruce M BomanDepartment of Mathematical Sciences, Center for Applications of Mathematics in Medicine, Newark, Delaware, USA.
Thien-Nam DinhDepartment of Computer & Information Sciences, University of Delaware, Newark, Delaware, USA.
Keith DeckerDepartment of Computer & Information Sciences, University of Delaware, Newark, Delaware, USA.
Brooks EmerickDepartment of Mathematics, Kutztown University of Pennsylvania, Kutztown, Pennsylvania, USA.
Shirin R ModaraiCenter for Translational Cancer Research, Helen F. Graham Cancer Center & Research Institute, Newark, Delaware, USA.
Lynn M OpdenakerCenter for Translational Cancer Research, Helen F. Graham Cancer Center & Research Institute, Newark, Delaware, USA.
Jeremy Z FieldsCATX Inc., Princeton, New Jersey, USA.
Christopher RaymondDepartment of Mathematical Sciences, Center for Applications of Mathematics in Medicine, Newark, Delaware, USA.
Gilberto SchleinigerDepartment of Mathematical Sciences, Center for Applications of Mathematics in Medicine, Newark, Delaware, USA.

Funding

Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI MELINDA K DUNCAN · 2012 to 2026
$67.2M
NIGMS NIH HHS P20 GM103446
6 · The paper itself

Abstract

Tissue organization is fundamental to the form and function of most, if not all, multicellular organisms. But what specifies the precise histologic organization of cells in tissues of plants and animals is unclear. We hypothesize that a tissue code exists that is the basis for dynamic maintenance of tissue organization. Any code for tissue organization must account for how the dynamics of tissue renewal maintain histologic structure. Accordingly, we modeled the dynamics of crypt renewal to determine how the organization of cells is maintained in colonic epithelium. Specifically, we modeled spatial and temporal asymmetries of cell division and established that five simple mathematical laws ([1] timing of cell division, [2] temporal order of cell division, [3] spatial direction of cell division, [4] number of cell divisions, and [5] cell lifespan) constitute a set of biological rules for colonic epithelia. Our results indicate that these rules form the basis of precise organization of cells in colonic epithelium during continuous crypt renewal. These five laws might even provide a means to understand the mechanisms that underlie organization of other tissue types, and how genetic alterations cause tissue disorganization that leads to birth defects and tissue pathology like cancer.

Indexed as

ColonEpithelial CellsIntestinal MucosaAnimalsCell DivisionHumansModels, Biological

Identifiers

PMID40657955
PMCPMC12258116

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.