Evidence map›Paper›PMID 40664642›Full record

ArticleCell death discovery2025

Epigenetic targeting of MECOM/KRAS axis by JIB-04 impairs tumorigenesis and cisplatin resistance in MECOM-amplified ovarian cancer.

Ibha Singh, Amarnath Karna, Anita Prajapati, Ujjawal Solanki, Archana Mukherjee, Sheetal Uppal, Pawan Malhotra, Manoj Kumar, Pallavi Agarwal

Abstract read
In one paragraph

Article in Cell death discovery, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Ibha SinghAmity Institute of Molecular Medicine and Stem Cell Research, Amity University Uttar Pradesh, Noida, India.
Amarnath Karna *Amity Institute of Molecular Medicine and Stem Cell Research, Amity University Uttar Pradesh, Noida, India.
Anita Prajapati *Amity Institute of Molecular Medicine and Stem Cell Research, Amity University Uttar Pradesh, Noida, India.
Ujjawal SolankiAmity Institute of Genome Engineering, Amity University Uttar Pradesh, Noida, India.ORCID http://orcid.org/0009-0008-8477-3495
Archana MukherjeeRadiopharmaceuticals Division, Bhabha Atomic Research Centre, Mumbai, India.
Sheetal UppalMolecular Biology Division, Bhabha Atomic Research Centre, Mumbai, India.ORCID http://orcid.org/0000-0002-2627-2536
Pawan MalhotraInternational Centre for Genetic Engineering and Biotechnology (ICGEB), Aruna Asaf Ali Marg, Jawaharlal Nehru University, Delhi, India.ORCID http://orcid.org/0000-0002-7384-6280
Manoj KumarAmity Institute of Genome Engineering, Amity University Uttar Pradesh, Noida, India. mkumar18@amity.edu.ORCID http://orcid.org/0000-0001-7689-9073
Pallavi AgarwalAmity Institute of Molecular Medicine and Stem Cell Research, Amity University Uttar Pradesh, Noida, India. pagarwal6@amity.edu.ORCID http://orcid.org/0000-0003-3139-5589

Funding

DAE | Board of Research in Nuclear Sciences (BRNS) 58/14/16/2021- BRNSDepartment of Biotechnology, Ministry of Science and Technology (DBT) BT/RLF/Re-entry/16/2016Department of Science and Technology, Ministry of Science and Technology (DST) ECR/2017/000857Indian Council of Medical Research (ICMR) 2021-12632
6 · The paper itself

Abstract

Copy number gene amplification and associated overexpression of driver oncogenes are genetic events that contribute to cancer progression and drug resistance. MDS1 and EVI1 Complex locus (MECOM) gene is copy number amplified and overexpressed in aggressive epithelial ovarian cancers. The biological function and precise molecular mechanism of MECOM in the progression and drug resistance of ovarian cancer remain unclear. Here, we unravel MECOM as a regulator of KRAS and its downstream MAP Kinase signalling pathway, and also identify epigenetic inhibitor JIB-04 as a pharmacological agent targeting MECOM/KRAS axis. RNAi-mediated attenuation of MECOM in ovarian cancer cells harboring MECOM amplification reduced their proliferation, impaired colony formation, and impeded cellular migration. ChIP-qPCR analysis confirmed binding of MECOM to the KRAS promoter, suggesting direct regulation of the KRAS gene at the transcriptional level. Further, MECOM promoted cellular proliferation by regulating KRAS-mediated ERK/ZEB1 signalling cascade. The anti-tumorigenic effects due to MECOM loss were phenocopied by the treatment of ovarian cancer cells harboring MECOM amplification with JIB-04 epigenetic inhibitor targeting Jumonji domain histone demethylase enzymes. By ChIP-qPCR, we show that JIB-04 induced transcriptional changes of MECOM by altering H3K27me3 demethylation at its promoter region. We further report that ovarian cancer cells expressing high-MECOM levels exhibit cisplatin resistance, which could be effectively reversed upon pre-treatment with JIB-04. The therapeutic efficacy of JIB-04 was further demonstrated in mice bearing ovarian cancer cell xenografts, where JIB-04 slowed down the tumor growth in corroboration with diminishing MECOM expression. RNA-sequencing analysis identified potential cisplatin resistance gene, SUB1, being regulated by JIB-04-mediated modulation of MECOM expression. Altogether, these data suggest that epigenetic silencing of MECOM by JIB-04 mediated H3K27me3 modulation is an important mechanism in ovarian cancer and provide a new therapeutic target for the treatment of ovarian cancers harboring MECOM amplification.

Identifiers

PMID40664642
PMCPMC12264112

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.