Evidence map›Paper›PMID 40670644›Full record

ArticleScientific reports2025

Understanding the evolutionary dynamics of Monkeypox virus through less explored pathways.

Alessandra Mistral De Pascali, Ludovica Ingletto, Martina Brandolini, Ettore Rocchi, Martina Tarozzi, Maria Elena Turba, Rita Casadio, Fabio Gentilini, Giulia Gatti, Laura Dionisi and 13 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Alessandra Mistral De Pascali *Unit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Ludovica Ingletto *Department of Medical and Surgical Sciences (DIMEC), University of Bologna, Bologna, 40138, Italy.
Martina BrandoliniUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Ettore RocchiDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Bologna, 40138, Italy.
Martina TarozziDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Bologna, 40138, Italy.
Maria Elena TurbaXenturion Diagnostics srl, Forlì, 47122, Italy.
Rita CasadioInstitute of Biomembranes, Bioenergetics and Molecular Biotechnologies, Consiglio Nazionale delle Ricerche (CNR), Bari, 70126, Italy.
Fabio GentiliniDepartment of Veterinary Medical Sciences (DIMEVET), University of Bologna, Bologna, 40064, Italy.
Giulia GattiUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Laura DionisiUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Claudia ColosimoUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Massimiliano GuerraUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Silvia ZannoliUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Giorgio DiraniUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Maria Sofia MontanariUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Anna MarzuccoUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Laura GrumiroUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Giada RossiniDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Bologna, 40138, Italy.
Tiziana LazzarottoDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Bologna, 40138, Italy.
Monica CriccaUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Gastone CastellaniDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Bologna, 40138, Italy.
Vittorio SambriUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Cesena, 47522, Italy.
Alessandra ScagliariniDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Bologna, 40138, Italy. alessand.scagliarini@unibo.it.

Funding

ELIXIRxNexGenIT IR0000010MUR PNRR Extended Partnership initiative on Emerging Infectious Diseases (PNRR, INF-ACT) PE00000007
6 · The paper itself

Abstract

Recent Monkeypox virus (MPXV) outbreaks in non-endemic regions have highlighted the need for genomic surveillance to support epidemiological investigations and monitor viral evolution. In this paper we present the results of genomic characterization and analyses of mechanisms of human adaptation, including APOBEC-style mutations, performed on 11 MPXV isolates, collected from May to September 2022, from Emilia-Romagna (Italy). Phylogenetic analysis confirmed all strains belonged to Clade IIb. Viruses from male patients were classified within lineage B (sub-lineages B.1, B.1.3, B.1.12), while a strain from a female patient was assigned to lineage A (A.2.3), with epidemiological links to Ghana. This represents the fourth detection of an A.2.3 strain of African origin outside the continent. Disruptions were identified in two genes: OPG176 (similar to VACV-Cop A46R), as reported in lineage A, and OPG023 (similar to VACV-Cop D7L), resulting in protein truncation that may suggest a possible pattern of human adaptation. These findings further enhance our understanding of MPXV Clade IIb diversity through characterization of a rarer variant giving insights from a less explored epidemiological pathway.

Indexed as

Evolution, MolecularMonkeypox virusMpox, MonkeypoxFemaleGenome, ViralHumansItalyMaleMutationPhylogeny

Identifiers

PMID40670644
PMCPMC12267426

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.