Evidence map›Paper›PMID 40694159›Full record

ArticleClinical and experimental medicine2025

Bioinformatic analysis and retrospective clinical study identifying DNAJB4 as a pan-cancer biomarker with a highlight on kidney cancer.

Chuanmin Chu, Bingnan Lu, Wenjia Fu, Muchen Li, Keqin Dong, Donghao Lyu, Yuntao Yao, Yuanan Li, Yifan Liu, Xiuwu Pan and 1 more

Abstract read
In one paragraph

Article in Clinical and experimental medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chuanmin Chu *Department of Urology, Zhongda Hospital Affiliated to Southeast University, Nanjing, 210000, China.
Bingnan Lu *Department of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China.
Wenjia Fu *Department of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China.
Muchen LiDepartment of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China.
Keqin DongDepartment of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China.
Donghao LyuDepartment of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China.
Yuntao YaoDepartment of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China.
Yuanan LiDepartment of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China.
Yifan LiuDepartment of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China. lyf0501@sjtu.edu.cn.
Xiuwu PanDepartment of Urology, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, No. 1665 Kongjiang Road, Shanghai, 200092, China. panxiuwu@126.com.
Ming ChenDepartment of Urology, Zhongda Hospital Affiliated to Southeast University, Nanjing, 210000, China. mingchenseu@126.com.

Funding

Jiangsu Province High-Level Hospital Construction Funds GSP-LCYJFH11Jiangsu Provincial Key Discipline and Laboratory Construction Funds of Urology 2023YXZDXK02Nanjing Key Science and Technology Special Project (Life and Health), Medical-Engineering Collaborative Project 202305033National clinical key discipline construction funds CZXM-ZK-47National Natural Science Foundation of China 82072806Shanghai Rising-Star Program 23QC1401400
6 · The paper itself

Abstract

DNAJB4 plays a crucial role in tumor suppression and proteostasis across various cancers. However, a comprehensive pan-cancer analysis of DNAJB4 remains lacking. We performed an extensive pan-cancer analysis to assess DNAJB4 expression and its clinical value. Analyses included competing endogenous RNA, protein-protein interaction networks, tumor purity, genomic profiling, immune microenvironment evaluation, and drug sensitivity. Gene set enrichment analysis was used to identify key pathways associated with DNAJB4. Additionally, DNAJB4 expression was evaluated in a cohort of 370 kidney neoplasm patients using immunohistochemistry to explore its clinical significance. DNAJB4 expression was significantly lower in tumor tissues compared to normal tissues in pan-cancer analysis. Reduced expression of DNAJB4 correlated with clinical outcomes, tumor purity, genomic alterations, immune microenvironment features, and drug sensitivity. In kidney neoplasm patients, DNAJB4 expression was significantly lower in tumor tissues (P value < 0.001) and was associated with poor prognosis, including progression-free survival (P value < 0.01) and overall survival (P value < 0.05). Higher DNAJB4 levels were linked to advanced tumor stages (P value < 0.001 for T2b-T4, P value < 0.01 for stages 3-4). DNAJB4 serves as a multifunctional biomarker in pan-cancer, particularly in kidney neoplasm, and is closely related to tumorigenesis, staging, and prognosis. Targeting DNAJB4 could provide new therapeutic avenues for cancer treatment.

Indexed as

Biomarkers, TumorHSP40 Heat-Shock ProteinsKidney NeoplasmsMolecular ChaperonesAgedComputational BiologyFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedPrognosisRetrospective StudiesTumor MicroenvironmentBiomarkers, TumorHSP40 Heat-Shock ProteinsMolecular ChaperonesBioinformatic analysisBiomarkerDNAJB4Immunohistochemical stainingKidney cancerPan-cancer

Identifiers

PMID40694159
PMCPMC12283797

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.