Evidence map›Paper›PMID 40739613›Full record

ArticleBMC plant biology2025

Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana.

Yushi Peng, Shujuan Guo, Ben Lei, Linhui Yu, Qiuling Wang

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yushi PengInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
Shujuan GuoInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
Ben LeiInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
Linhui YuInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
Qiuling WangInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China. wangqiuling198@163.com.

Funding

National Natural Science Foundation of China 32400246Shaanxi Provincial Natural Science Fund 22JR5RA831
6 · The paper itself

Abstract

backgroundPlants have evolved multiple strategies to cope with the ever-changing external environment. Autophagy, as one of the crucial mechanisms involved, has been demonstrated to play a pivotal role in plant responses and adaptation to abiotic stresses. However, the precise molecular mechanisms underlying the role of autophagy in mediating cold stress remain to be fully elucidated.

resultsIn this study, we demonstrated that autophagy mutants presented increased freezing tolerance under both non-acclimated and cold-acclimated conditions in Arabidopsis. Autophagy positively regulates the expression of anthocyanin biosynthesis-related genes, thereby influencing anthocyanin accumulation in Arabidopsis under low-temperature conditions. Moreover, we found that cold stress directly suppresses the expression of autophagy-related genes and reduces autophagic flux in Arabidopsis. The RNA-seq data revealed that cold-responsive genes were pre-activated in the autophagy mutant atg13ab even before cold treatment. Additionally, we observed constitutive accumulation of the dehydrin protein COR47 in atg13ab mutant.

conclusionsTaken together, these data suggest that autophagy is a negative regulator of freezing tolerance in Arabidopsis.

Indexed as

ArabidopsisAutophagyFreezingAcclimatizationAnthocyaninsArabidopsis ProteinsCold-Shock ResponseGene Expression Regulation, PlantMutationAnthocyaninsArabidopsis ProteinsArabidopsisatg13abATG8AutophagyCold stressCOR47

Identifiers

PMID40739613
PMCPMC12312434

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.