Evidence map›Paper›PMID 40748043›Full record

ArticleeLife2025

Conserved and unique features of terminal telomeric sequences in ALT-positive cancer cells.

Benura Azeroglu, Wei Wu, Raphael Pavani, Ranjodh Singh Sandhu, Tadahiko Matsumoto, André Nussenzweig, Eros Lazzerini-Denchi

Abstract read
In one paragraph

Article in eLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Benura AzerogluLaboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, United States.ORCID https://orcid.org/0000-0001-7243-384X
Wei WuLaboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, United States.
Raphael PavaniLaboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, United States.ORCID https://orcid.org/0000-0002-7187-2995
Ranjodh Singh SandhuLaboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, United States.ORCID https://orcid.org/0009-0008-2340-3423
Tadahiko MatsumotoLaboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, United States.
André NussenzweigLaboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, United States.
Eros Lazzerini-DenchiLaboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, United States.ORCID https://orcid.org/0000-0001-5378-4644

Funding

NIH HHS 1-ZIA-BC011815-03
6 · The paper itself

Abstract

A significant portion of human cancers utilize a recombination-based pathway, alternative lengthening of telomeres (ALT), to maintain telomere length. Targeting the ALT is of growing interest as a cancer therapy, yet a substantial knowledge gap remains regarding the basic features of telomeres in ALT-positive cells. To address this, we adopted END-seq, an unbiased sequencing-based approach, to define the identity and regulation of the terminal sequences of chromosomes in ALT cells. Our data reveal that the terminal portions of chromosomes in ALT cells contain canonical telomeric sequences with the same terminus bias (-ATC) observed in non-ALT cells. Furthermore, as reported for non-ALT cells, POT1 is required to preserve the precise regulation of the 5' end in cells that maintain telomere length using the ALT pathway. Thus, the regulation of the terminal 5' of chromosomes occurs independently of the mechanism of telomere elongation. Additionally, we employed an S1 endonuclease-based sequencing method to determine the presence and origin of single-stranded regions within ALT telomeres. These data shed light on conserved and unique features of ALT telomeres.

Indexed as

NeoplasmsTelomereTelomere HomeostasisCell Line, TumorHumansShelterin ComplexTelomere-Binding ProteinsPOT1 protein, humanShelterin ComplexTelomere-Binding ProteinsALTcancer biologychromosomesEND-seqgene expressionhumanmousessDNAtelomeres

Identifiers

PMID40748043
PMCPMC12316455

What Socratic holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.