Evidence map›Paper›PMID 40750010›Full record

ArticleExperimental cell research2025

Single cell RNA sequencing reveals shifts in cell maturity and function of endogenous and infiltrating cell types in response to acute intervertebral disc injury.

Sade W Clayton, Aimy Sebastian, Stephen P Wilson, Nicholas R Hum, Remy E Walk, Garrett W D Easson, Rachana Vaidya, Kaitlyn S Broz, Gabriela G Loots, Simon Y Tang

Abstract read
In one paragraph

Article in Experimental cell research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Sade W ClaytonDepartment of Orthopaedic Surgery, Washington University in St. Louis, St. Louis, MO, United States.
Aimy SebastianPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, United States.
Stephen P WilsonPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, United States.
Nicholas R HumPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, United States.
Remy E WalkDepartment of Orthopaedic Surgery, Washington University in St. Louis, St. Louis, MO, United States.
Garrett W D EassonDepartment of Orthopaedic Surgery, Washington University in St. Louis, St. Louis, MO, United States.
Rachana VaidyaDepartment of Orthopaedic Surgery, Washington University in St. Louis, St. Louis, MO, United States.
Kaitlyn S BrozDepartment of Orthopaedic Surgery, Washington University in St. Louis, St. Louis, MO, United States.
Gabriela G LootsPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, United States; Department of Orthopaedic Surgery, University of California Davis Health, Sacramento, CA, United States.
Simon Y TangDepartment of Orthopaedic Surgery, Washington University in St. Louis, St. Louis, MO, United States. Electronic address: simon.tang@wustl.edu.

Funding

Resource Based Center for Musculoskeletal Biology and Medicine (Overall Application)P30AR074992 · NIAMS · WASHINGTON UNIVERSITY · PI MATTHEW J SILVA · 2019 to 2026
$6.8M
The Role of the Osteoblast Secretome in Bone FormationP30AR057235 · NIAMS · WASHINGTON UNIVERSITY · PI SWARNKAR, GAURAV · 2009 to 2018
$5.7M
Intervertebral Disc Degeneration and Cross-Talk with the Nervous System - NOSI Diversity SupplementR01AR077678 · NIAMS · WASHINGTON UNIVERSITY · PI SETTON, LORI A., TANG, SIMON YUE-CHEONG · 2020 to 2024
$3.7M
The role of physiologic and pathologic AGEs on RAGE signaling in IVD degenerationR01AR074441 · NIAMS · WASHINGTON UNIVERSITY · PI TANG, SIMON YUE-CHEONG · 2019 to 2024
$2.1M
TRAINING IN REGENERATIVE MEDICINET32EB028092 · NIBIB · WASHINGTON UNIVERSITY · PI Farshid Guilak · 2020 to 2026
$2.0M
Cabinet microCT System for Musculoskeletal Specimen ImagingS10OD028573 · OD · WASHINGTON UNIVERSITY · PI SILVA, MATTHEW J · 2020 to 2020
$407k
The Role of VEGF in the Development of Low Back Pain Following IVD InjuryR21AR081517 · NIAMS · WASHINGTON UNIVERSITY · PI GUPTA, MUNISH, TANG, SIMON YUE-CHEONG · 2023 to 2024
$371k
NIAMS NIH HHS P30 AR057235NIAMS NIH HHS P30 AR074992NIAMS NIH HHS R01 AR074441NIAMS NIH HHS R01 AR077678NIAMS NIH HHS R21 AR081517NIBIB NIH HHS T32 EB028092NIH HHS S10 OD028573Wellcome Trust
6 · The paper itself

Abstract

Intervertebral disc (IVD) degeneration contributes to disabling back pain. Degeneration can be initiated by injury and progressively leads to an irreversible loss of cells and function. IVD function restoration through cell replacement therapies have had limited success due to knowledge gaps in the critical cell populations important for repair. Here, we used single cell RNA sequencing to identify the transcriptional changes of IVD resident and infiltrating cell populations from Control and Injured coccygeal IVDs extracted from 12-week-old female C57BL/6J mice 7 days post injury. Clustering, gene ontology, and pseudotime trajectory analyses determined transcriptomic divergences with injury, flow cytometry identified they types of infiltrating immune cells, and immunofluorescence was utilized to define mesenchymal stem cell (MSC) localization. We identified 11 distinct clusters that included IVD, immune, vascular cells, and MSCs. Differential gene expression analysis determined that Outer Annulus Fibrosus, Neutrophils, Saa2-High MSCs, Macrophages, and Krt18

Indexed as

Intervertebral DiscIntervertebral Disc DegenerationSingle-Cell AnalysisAnimalsFemaleMesenchymal Stem CellsMiceMice, Inbred C57BLNucleus PulposusSequence Analysis, RNATranscriptomeCartilageDegenerationIntervertebral discIVDMSCRepairscRNASeqSpine

Identifiers

PMID40750010
PMCPMC12542865

What Socratic holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.