Evidence map›Paper›PMID 40762953›Full record

ArticleThe Journal of clinical investigation2025

Chromatin factor YY1 controls fetal hematopoietic stem cell migration and engraftment in mice.

Sahitya Saka, Zhanping Lu, Yinghua Wang, Peng Liu, Deependra K Singh, Junki P Lee, Carmen G Palii, Tyler R Alvarez, Anna Lfv Assumpção, Xiaona You and 4 more

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Sahitya SakaDepartment of Medical Sciences, School of Veterinary Medicine.
Zhanping LuDepartment of Medical Sciences, School of Veterinary Medicine.
Yinghua WangDepartment of Medical Sciences, School of Veterinary Medicine.
Peng LiuCarbone Cancer Center.
Deependra K SinghDepartment of Medical Sciences, School of Veterinary Medicine.
Junki P LeeDepartment of Medical Sciences, School of Veterinary Medicine.
Carmen G PaliiCarbone Cancer Center.
Tyler R AlvarezDepartment of Medical Sciences, School of Veterinary Medicine.
Anna Lfv AssumpçãoDepartment of Medical Sciences, School of Veterinary Medicine.
Xiaona YouCarbone Cancer Center.
Jing ZhangCarbone Cancer Center.
Marjorie BrandCarbone Cancer Center.
Michael L AtchisonDepartment of Biomedical Sciences, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Xuan PanDepartment of Medical Sciences, School of Veterinary Medicine.

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Justine Yang Bruce · 1985 to 2026
$142.6M
University of Wisconsin Institute for Clinical and Translational ResearchUL1TR002373 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI ELIZABETH S BURNSIDE, Allan R. Brasier · 2017 to 2026
$75.9M
NRSA Training CoreTL1TR002375 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI Vivek Prabhakaran · 2017 to 2026
$8.4M
Transcriptional Control During ErythropoiesisR01DK098449 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Marjorie Carole Brand, JEFFREY A RANISH · 2013 to 2026
$5.8M
The role of TCOF1 in germline predisposition to and in leukemic transformation of chronic myelomonocytic leukemiaR01CA152108 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Jing Zhang · 2011 to 2026
$5.4M
Mechanisms of lineage plasticity revealed by YY1 deficiency.R01AI162879 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ATCHISON, MICHAEL LEE · 2021 to 2025
$2.5M
YY1-dependent chromatin structure stabilization of B lineage commitmentR01AI155540 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ATCHISON, MICHAEL LEE · 2021 to 2025
$2.5M
Mechanisms that Regulate Self-renewal and Proliferation in Hematopoietic Stem CellsR01HL146540 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI PAN, XUAN · 2019 to 2023
$1.9M
Molecular and Cellular Mechanisms of Mutant ASXL1-driven Clonal HematopoiesisR01AG081469 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI Jing Zhang · 2024 to 2026
$1.7M
Molecular Mechanisms of Hematopoietic Stem Cell DevelopmentR03OD026603 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI PAN, XUAN · 2019 to 2020
$230k
NCATS NIH HHS TL1 TR002375NCATS NIH HHS UL1 TR002373NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA152108NHLBI NIH HHS R01 HL146540NIAID NIH HHS R01 AI155540NIAID NIH HHS R01 AI162879NIA NIH HHS R01 AG081469NIDDK NIH HHS R01 DK098449NIH HHS R03 OD026603
6 · The paper itself

Abstract

The fetal liver is the primary site of hematopoietic stem cell (HSC) generation during embryonic development. However, the molecular mechanisms governing the transition of hematopoiesis from the fetal liver to the BM remain incompletely understood. Here, we identify the mammalian Polycomb Group protein Yin Yang 1 (YY1) as a key regulator of this developmental transition. Conditional deletion of Yy1 in the hematopoietic system during fetal development results in neonatal lethality and depletion of the fetal HSC pool. YY1-deficient fetal HSCs exhibit impaired migration and fail to engraft in the adult BM, thereby losing their ability to reconstitute hematopoiesis. Transcriptomic analysis reveals that Yy1 KO disrupts genetic networks controlling cell motility and adhesion in fetal hematopoietic stem and progenitor cells (HSPCs). Notably, YY1 does not directly bind the promoters of most dysregulated genes. Instead, it modulates chromatin accessibility at regulatory loci, orchestrating broader epigenetic programs essential for HSPC migration and adhesion. Together, these findings establish YY1 as a critical epigenetic regulator of fetal HSC function and provide a mechanistic framework to further decipher how temporal epigenomic configurations determine HSC fetal-to-adult transition during development.

Indexed as

Cell MovementChromatinHematopoietic Stem CellsHematopoietic Stem Cell TransplantationYY1 Transcription FactorAnimalsEpigenesis, GeneticFemaleHematopoiesisMiceMice, KnockoutChromatinYy1 protein, mouseYY1 Transcription FactorDevelopmentEmbryonic developmentHematologyHematopoietic stem cells

Identifiers

PMID40762953
PMCPMC12483607

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.