Evidence mapPaperPMID 40764512Full record

ArticleNPJ biofilms and microbiomes2025

Genomic insights and metabolic profiling of gut commensal Luoshenia tenuis at strain level.

Xin-Wei Sun, Hao-Jie Huang, Yu-Zhi Zhao, Hao-Yu Chen, Chang-Yu Wang, Zheng Zhou, Yu Jiang, Run-Yu Han, He Jiang, Chang Liu and 1 more

Abstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xin-Wei SunState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Hao-Jie HuangState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Yu-Zhi ZhaoState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Hao-Yu ChenState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Chang-Yu WangState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Zheng ZhouState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Yu JiangState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Run-Yu HanState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
He JiangState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China.
Chang LiuState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China. liu.c@sdu.edu.cn.
Shuang-Jiang LiuState Key Laboratory of Microbial Technology, Shandong University, Qingdao, PR China. liusj@sdu.edu.cn.

Funding

National Key Research and Development Program of China No.2022YFA1304103National Natural Science Foundation of China for Excellent Young Scholars No. 32422002Shandong Province Natural Science Foundation for Excellent Young Scholars No. ZR2023YQ020SKLMT Frontiers and Challenges Project No. SKLMTFCP-2023-01
6 · The paper itself

Abstract

Luoshenia tenuis, a newly identified gut commensal microbe from the family Christensenellaceae, has shown therapeutic effects on weight control and metabolic disorders in model mice. Bacterial strains are essential for investigations on the host-microbe interaction and further development of medical applications. In this study, we collected 27 strains of L. tenuis from the Christensenellaceae Gut Microbial Biobank (ChrisGMB) and sequenced their complete genomes. Our analysis revealed considerable genetic diversity and genomic plasticity. Metabolic prediction indicated that L. tenuis had a preference for metabolizing plant-derived carbohydrates and the ability to synthesize various amino acids and cofactors. In silico analysis, along with in vitro experiments, validated that L. tenuis strains possessed strong acid tolerance and limited antibiotic resistance, suitable traits for oral probiotic development. Further volatile metabolomics and bile acid transformation profiling revealed that L. tenuis was capable of producing metabolites with previously-identified beneficial effects, along with extensive bile acid modification, potentially contributing to its positive impact on host metabolism. This study provides essential insight into strain-level functional and genomic features, laying a foundation for future research towards the development of L. tenuis-based therapies for metabolic disease.

Indexed as

EubacterialesGastrointestinal MicrobiomeGenome, BacterialMetabolomeAnimalsBile Acids and SaltsGenomicsHumansMetabolomicsMicePhylogenyProbioticsSymbiosisBile Acids and Salts

Identifiers

PMID40764512
PMCPMC12325933

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.