Evidence map›Paper›PMID 40768112›Full record

ArticleJournal of computer-aided molecular design2025

Exploring Oxazolidinone scaffolds for future antibiotics: synthesis and computational insights with DFT, docking, ADME and MD simulation.

Sanjay Soni, Khushbu Patil, Sharad Gavale, Soyeb Pathan, Rasana Yadav, Prashant R Murumkar, Rahul Kadu

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Article in Journal of computer-aided molecular design, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sanjay SoniDepartment of Applied Science and Humanities, School of Engineering and Sciences, MIT Art, Design and Technology University, Pune, Maharashtra, 412 201, India.ORCID 0009-0001-3046-9403
Khushbu PatilDepartment of Applied Science and Humanities, School of Engineering and Sciences, MIT Art, Design and Technology University, Pune, Maharashtra, 412 201, India.ORCID 0000-0002-7768-5162
Sharad GavaleDepartment of Applied Science and Humanities, School of Engineering and Sciences, MIT Art, Design and Technology University, Pune, Maharashtra, 412 201, India.ORCID 0009-0006-0802-3460
Soyeb PathanResearch and Development Cell (RDC), Parul Institute of Applied Sciences (PIAS), Parul University, Vadodara, Gujarat, 391 760, India.ORCID 0000-0003-3762-9331
Rasana YadavFaculty of Pharmacy, The Maharaja Sayajirao University of Baroda, Vadodara, Gujarat, India.ORCID 0000-0002-9525-8447
Prashant R MurumkarFaculty of Pharmacy, The Maharaja Sayajirao University of Baroda, Vadodara, Gujarat, India.ORCID 0000-0001-7113-0345
Rahul KaduDepartment of Applied Science and Humanities, School of Engineering and Sciences, MIT Art, Design and Technology University, Pune, Maharashtra, 412 201, India. rahul_kadu25@yahoo.co.in.ORCID 0000-0003-1498-9764

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of antibiotic-resistance is a serious concern in maintaining global health in this era, which necessitates constant advancements in antibacterial research for effective antibacterial solutions. To address this issue, a series of oxazolidinone derivatives bearing biologically significant functionalities were efficiently synthesized and screened for in vitro antimicrobial activities against four bacterial strains viz. two Gram positive strains: S. aureus, S. pyogenes, two Gram negative strains: E. coli, P. aeruginosa, and two fungal strains namely, C. albicans, A. niger, in comparison to standard drugs like Ampicillin and Nystatin, respectively. Further, DFT study were performed and these compounds were screened for their binding efficacies against the respective target proteins, followed by prediction of drug-likeness and ADME properties. Among the oxazolidinone derivatives, compounds 7 g and 7i display excellent activity. Interestingly, 7 g emerged as a promising candidate, demonstrating better effectiveness against E. coli (12 µg/mL), P. aeruginosa (20 µg/mL) and S. aureus (50 µg/mL) compared to reference drug Ampicillin. Compound 7a exhibited excellent activity against A. niger and C. albicans with an MIC of 50 µg/mL and 100 µg/mL compared to Nystatin (MIC = 100 µg/mL). Molecular Dynamics simulations were performed on the target protein for 7 g, demonstrating exceptional biological activity and binding affinity in in silico studies. These results suggest that oxazolidinone derivative 7 g, 7i and 7k is a promising therapeutic candidate for drug-resistant bacterial and fungal infections.

Indexed as

Anti-Bacterial AgentsOxazolidinonesDensity Functional TheoryMicrobial Sensitivity TestsMolecular Docking SimulationMolecular Dynamics SimulationStructure-Activity RelationshipAnti-Bacterial AgentsOxazolidinonesADMETAntibioticsDFT studiesHeterocyclesMD simulationMolecular DockingOxazolidinone

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.