Evidence map›Paper›PMID 40770090›Full record

ArticleCommunications biology2025

The acquisition of additional control over quorum sensing regulation reduces the variability of final cell density in Burkholderia.

Marco Fondi, Christopher Riccardi, Francesca Di Patti, Francesca Vaccaro, Francesca Coscione, Alessio Mengoni, Elena Perrin

Abstract read
In one paragraph

Article in Communications biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Marco FondiDepartment of Biology, University of Florence, Sesto Fiorentino, Italy. marco.fondi@unifi.it.ORCID http://orcid.org/0000-0001-9291-5467
Christopher RiccardiDepartment of Biology, University of Florence, Sesto Fiorentino, Italy.ORCID http://orcid.org/0000-0002-5310-6437
Francesca Di PattiCentro Interdipartimentale per lo Studio delle Dinamiche Complesse, University of Florence, Sesto Fiorentino, Italy.
Francesca VaccaroDepartment of Biology, University of Florence, Sesto Fiorentino, Italy.
Francesca CoscioneDepartment of Biology, University of Florence, Sesto Fiorentino, Italy.ORCID http://orcid.org/0009-0003-2854-1028
Alessio MengoniDepartment of Biology, University of Florence, Sesto Fiorentino, Italy.
Elena PerrinDepartment of Biology, University of Florence, Sesto Fiorentino, Italy.ORCID http://orcid.org/0000-0001-5148-3178

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria usually possess more than one quorum sensing (QS) regulatory modules that sometimes form complex regulatory networks. These configurations have evolved through the integration of novel transcription factors into the native regulatory systems. However, the selective advantages provided by these alternative configurations on QS-related phenotypes is poorly predictable only based on their underlying network structure. Here, we show that the acquisition of extra regulatory modules of QS has important consequences on the overall regulation of microbial growth by significantly reducing the variability in the final cell density in Burkholderia. By mapping the distribution of horizontally transferred QS modules in extant bacterial genomes, we found that these tend to add up to already-present modules in the majority of cases. We then selected a strain harboring two intertwined QS modules and, using mathematical modeling, we predicted an intrinsic ability of the newly acquired module to buffer the variability in the final cell density. We validated this prediction choosing one strain possessing both systems, deleting one of the two and measuring parameters such as cell density and QS synthase promoter activity. Finally, using transcriptomics, we show that the de-regulation of metabolism likely plays a key role in differentiating the two configurations.

Indexed as

BurkholderiaGene Expression Regulation, BacterialQuorum SensingBacterial ProteinsGene Regulatory NetworksBacterial Proteins

Identifiers

PMID40770090
PMCPMC12328628

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.