Evidence map›Paper›PMID 40770919›Full record

ArticleACS chemical biology2025

CRISPR RiPCA for Investigating eIF4E-m

Gabriela Vega-Hernández, Jesse Duque, Brandon J C Klein, Dalia M Soueid, Jason C Rech, Hui Wang, Wenhui Zhou, Amanda L Garner

Abstract read
In one paragraph

Article in ACS chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Gabriela Vega-HernándezProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Jesse DuqueMichigan Center for Therapeutic Innovation, Michigan Medicine, University of Michigan, Ann Arbor, Michigan 48109, United States.
Brandon J C KleinDepartment of Medicinal Chemistry, College of Pharmacy, University of Michigan, Ann Arbor, Michigan 48109, United States.
Dalia M SoueidDepartment of Medicinal Chemistry, College of Pharmacy, University of Michigan, Ann Arbor, Michigan 48109, United States.
Jason C RechMichigan Center for Therapeutic Innovation, Michigan Medicine, University of Michigan, Ann Arbor, Michigan 48109, United States.
Hui WangPromega Corporation, San Luis Obispo, California 93401, United States.
Wenhui ZhouPromega Corporation, San Luis Obispo, California 93401, United States.
Amanda L GarnerProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0002-0870-3347

Funding

Cellular Biotechnology Training Program (CBTP) - Years 31-35T32GM145304 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Guizhi Zhu · 2022 to 2026
$2.6M
Chemical Biology Approaches for Investigating RNA-Protein InteractionsR35GM153185 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Amanda Garner · 2024 to 2026
$1.6M
Chemical Biology Approach for Validating and Manipulating Cellular RNA-Protein InteractionsR01GM135252 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GARNER, AMANDA · 2019 to 2022
$1.4M
NIGMS NIH HHS R01 GM135252NIGMS NIH HHS R35 GM153185NIGMS NIH HHS T32 GM145304
6 · The paper itself

Abstract

Post-transcriptional modifications expand the information encoded by an mRNA. These dynamic and reversible modifications are specifically recognized by reader RNA-binding proteins (RBPs), which mediate the regulation of gene expression, RNA processing, localization, stability, and translation. Given their crucial functions, any disruptions in the normal activity of these readers can have significant implications for cellular health. Consequently, the dysregulation of these RBPs has been associated with neurodegenerative disorders, cancers, and viral infections. Therefore, there has been growing interest in targeting reader RBPs as a potential therapeutic strategy since developing molecules that restore proper RNA processing and function may offer a promising avenue for treating diseases. In this work, we coupled our previously established live-cell RNA-protein interaction (RPI) assay, RNA interaction with Protein-mediated Complementation Assay (RiPCA), with CRISPR technology to build a new platform, CRISPR RiPCA. As a model for development, we utilized the interaction of eukaryotic translation initiation factor 4E (eIF4E), a reader RBP that binds to the m

Indexed as

CRISPR-Cas SystemsEukaryotic Initiation Factor-4ERNA CapsRNA, MessengerHEK293 CellsHumansProtein BindingRNA-Binding ProteinsEIF4E protein, humanEukaryotic Initiation Factor-4ERNA-Binding ProteinsRNA CapsRNA, Messenger

Identifiers

PMID40770919
PMCPMC12409724

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.